RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 IGHV3OR16-12A0A075B7B8 117 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 INS-IGF2F8WCM5 200 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 CORTO00230 105 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 TNFRSF6BO95407 300 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 IGKV1-5P01602 117 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 SMIM6P0DI80 62 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 HTN3P15516 51 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 PRSS3P35030 304 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 FXYD7P58549 80 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 SNRPD3P62318 126 aaKnown RBP5.26□□□□□ -1.57
CSDE1-206ENST00000483030 RNF212Q495C1 297 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 LRRC20Q8TCA0 184 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 FAM210BQ96KR6 192 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 KRTAP9-4Q9BYQ2 154 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 GSN-AS1Q9NRJ2 163 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 PKD1P98161 4303 aa5.26□□□□□ -1.57
CSDE1-206ENST00000483030 AGRNO00468 2067 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 TRAV30A0A087WSZ9 112 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 TMEM189A5PLL7 270 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 SMIM9A6NGZ8 99 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 ZNF705FA8MVS1 300 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-206ENST00000483030 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 FAM90A26D6RGX4 464 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 TCAPO15273 167 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 SCGB2A1O75556 95 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 IGKV3-20P01619 116 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 P0C879 139 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 ZNF705DP0CH99 300 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-206ENST00000483030 ZNF705BP0CI00 300 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-206ENST00000483030 PGAM2P15259 253 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 PI3P19957 117 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 RPL5P46777 297 aaKnown RBP5.25□□□□□ -1.57
CSDE1-206ENST00000483030 UCP3P55916 312 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 AP3S2P59780 193 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 DHODHQ02127 395 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 GAMTQ14353 236 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 UBE2NLQ5JXB2 153 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 FAM222AQ5U5X8 452 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 GPR107Q5VW38 600 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 ZNF705AQ6ZN79 300 aaPredicted RBP5.25□□□□□ -1.57
CSDE1-206ENST00000483030 MAPKAPK5-AS1Q8N8E1 139 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 SAMD12Q8N8I0 201 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 Q8WTZ3 238 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 NIPSNAP3BQ9BS92 247 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 PDCD10Q9BUL8 212 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 ENY2Q9NPA8 101 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 DKK2Q9UBU2 259 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 NAGKQ9UJ70 344 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 RAB26Q9ULW5 256 aa5.25□□□□□ -1.57
CSDE1-206ENST00000483030 A0A1W2PPQ1 181 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 TMEM238C9JI98 176 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 CDK2AP2O75956 126 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 IGLC1P0CG04 106 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 HLA-DRB4P13762 266 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 TGFBR1P36897 503 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 GPX4P36969 197 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-206ENST00000483030 RPS19P39019 145 aaKnown RBP5.24□□□□□ -1.57
CSDE1-206ENST00000483030 RND2P52198 227 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 AKR1C2P52895 323 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 DEFB1P60022 68 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 SP6Q3SY56 376 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 GDF5OSQ5U4N7 250 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 PRSS54Q6PEW0 395 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 NUDT10Q8NFP7 164 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 OR2D3Q8NGH3 330 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 OR1S2Q8NGQ3 325 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 GPX8Q8TED1 209 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 TP53RKQ96S44 253 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 VCX2Q9H322 139 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 NRN1Q9NPD7 142 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 RFNGQ9Y644 331 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 HLA-DRB4X5D2U9 266 aa5.24□□□□□ -1.57
CSDE1-206ENST00000483030 A0A0G2JRQ6 117 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 RPS10-NUDT3A0A1W2PQS6 291 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 CBY3A6NI87 242 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 M0QYG6 137 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 BUB3O43684 328 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 MED6O75586 246 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 ATG12O94817 140 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 S100A8P05109 93 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 IL4P05112 153 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 OR10J1P30954 320 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 NKX2-1P43699 371 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-206ENST00000483030 PIGPP57054 158 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 YPEL3P61236 119 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-206ENST00000483030 RND3P61587 244 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 NEDD8Q15843 81 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 BSXQ3C1V8 233 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 TMEM88Q6PEY1 159 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 SIGLEC15Q6ZMC9 328 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 SNX29P2Q8IUI4 249 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 SELENOHQ8IZQ5 122 aaKnown RBP5.23□□□□□ -1.57
CSDE1-206ENST00000483030 OR4B1Q8NGF8 309 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 NPIPB3Q92617 1050 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 RRNAD1Q96FB5 475 aaKnown RBP5.23□□□□□ -1.57
CSDE1-206ENST00000483030 LINC00052Q96N35 136 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 C2orf88Q9BSF0 95 aa5.23□□□□□ -1.57
CSDE1-206ENST00000483030 YTHDF1Q9BYJ9 559 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms