RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
ATG4B-220ENST00000482507 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 TACC2O95359 2948 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 PGPA6NDG6 321 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 HIGD1CA8MV81 97 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 SIAH2O43255 324 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
ATG4B-220ENST00000482507 NTF3P20783 257 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 TNXAQ16473 311 aa11.87□□□□□ -0.51
ATG4B-220ENST00000482507 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-220ENST00000482507 SHISA9B4DS77 424 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 E7EQL1 145 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 CRYGBP07316 175 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 ZNF25P17030 456 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-220ENST00000482507 PRRX1P54821 245 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 Q71RC1 249 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-220ENST00000482507 OR4B1Q8NGF8 309 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 TMEM133Q9H2Q1 129 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 KAAG1Q9UBP8 84 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 GP9P14770 177 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 MC5RP33032 325 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 CAMPP49913 170 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 LCN12Q6JVE5 192 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 PERPQ96FX8 193 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 MLST8Q9BVC4 326 aa11.86□□□□□ -0.51
ATG4B-220ENST00000482507 M0QZK8 103 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 MAJINQ3KP22 176 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 TRGV9Q99603 122 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-220ENST00000482507 A0A1B0GXF2 115 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
ATG4B-220ENST00000482507 NBEAP1P0C6P0 100 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
ATG4B-220ENST00000482507 LGALS7P47929 136 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 UBE2G1P62253 170 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 BATFQ16520 125 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
ATG4B-220ENST00000482507 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 TMEM116Q8NCL8 245 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 CLEC7AQ9BXN2 247 aa11.85□□□□□ -0.51
ATG4B-220ENST00000482507 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
ATG4B-220ENST00000482507 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 CRYBG3Q68DQ2 2970 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 LYNX1G3V0Z9 82 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 LYNX1P0DP58 116 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 CD24P25063 80 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 TEX45Q8NA69 505 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 DYNLRB1Q9NP97 96 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 HRNRQ86YZ3 2850 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-220ENST00000482507 UBR5O95071 2799 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-220ENST00000482507 IGHV2-26A0A0B4J1V2 119 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 TEX22C9J3V5 150 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-220ENST00000482507 GTSF1Q8WW33 167 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 URB1-AS1Q96HZ7 61 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 TMEM208Q9BTX3 173 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 SIGLEC9Q9Y336 463 aa11.84□□□□□ -0.51
ATG4B-220ENST00000482507 ABCA1O95477 2261 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 HYPMO75409 117 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 OR2J3O76001 311 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 HIST1H1EP10412 219 aaKnown RBP11.83□□□□□ -0.52
ATG4B-220ENST00000482507 EBLN2Q6P2I7 272 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 GPR82Q96P67 336 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 LPAR2Q9HBW0 351 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 NGBQ9NPG2 151 aa11.83□□□□□ -0.52
ATG4B-220ENST00000482507 IGLC2P0DOY2 106 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 ETFRF1Q6IPR1 90 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 KIR3DL3Q8N743 410 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 PRSS22Q9GZN4 317 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 MALRD1Q5VYJ5 2156 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 IGHV1-69-2A0A0G2JMI3 117 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 LTAP01374 205 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 TFPI2P48307 235 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 SRSF1Q07955 248 aaKnown RBP eCLIP11.82□□□□□ -0.526e-6■■□□□ 12.9
ATG4B-220ENST00000482507 SPATA12Q7Z6I5 190 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 Q9H3A6 140 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
ATG4B-220ENST00000482507 IGHV1-3A0A0C4DH29 117 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 TOMM40O96008 361 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 TCRAP04437 139 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 MMDQ15546 238 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 OR2D3Q8NGH3 330 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
ATG4B-220ENST00000482507 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 C19orf71A6NCJ1 209 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 M0QZ24 198 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 CD3EP07766 207 aa11.81□□□□□ -0.52
ATG4B-220ENST00000482507 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-220ENST00000482507 RNASEKQ6P5S7 137 aaKnown RBP11.81□□□□□ -0.52
ATG4B-220ENST00000482507 C5orf17Q8NAS9 161 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms