RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 VPREB3Q9UKI3 123 aa17.23■□□□□ 0.35
RUNX1-216ENST00000482318 RNF24Q9Y225 148 aa17.23■□□□□ 0.35
RUNX1-216ENST00000482318 NBPF19A0A087WUL8 3843 aa17.22■□□□□ 0.35
RUNX1-216ENST00000482318 TSPAN4O14817 238 aa17.22■□□□□ 0.35
RUNX1-216ENST00000482318 MS4A10Q96PG2 267 aa17.22■□□□□ 0.35
RUNX1-216ENST00000482318 PRDM13Q9H4Q3 707 aa17.22■□□□□ 0.35
RUNX1-216ENST00000482318 TMA7Q9Y2S6 64 aaKnown RBP17.22■□□□□ 0.35
RUNX1-216ENST00000482318 H3BRN7 92 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 GP9P14770 177 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 TCEAL7Q9BRU2 100 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 LINC00527Q9UJ94 153 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 GGTLC3B5MD39 225 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 PPIFP30405 207 aaKnown RBP17.21■□□□□ 0.35
RUNX1-216ENST00000482318 GPR183P32249 361 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 SUMO1P63165 101 aaKnown RBP17.21■□□□□ 0.35
RUNX1-216ENST00000482318 ADIRFQ15847 76 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 ZNF600Q6ZNG1 722 aa17.21■□□□□ 0.35
RUNX1-216ENST00000482318 CIARTQ8N365 385 aaPredicted RBP17.21■□□□□ 0.35
RUNX1-216ENST00000482318 GCN1Q92616 2671 aaKnown RBP17.21■□□□□ 0.34
RUNX1-216ENST00000482318 ITPR3Q14573 2671 aa17.2■□□□□ 0.34
RUNX1-216ENST00000482318 SMAD7O15105 426 aaKnown RBP17.2■□□□□ 0.34
RUNX1-216ENST00000482318 TRGV3P03979 118 aa17.2■□□□□ 0.34
RUNX1-216ENST00000482318 NBEAP1P0C6P0 100 aa17.2■□□□□ 0.34
RUNX1-216ENST00000482318 C15orf54Q8N8G6 183 aa17.2■□□□□ 0.34
RUNX1-216ENST00000482318 CLEC3BP05452 202 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 ADMP35318 185 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 RPL23P62829 140 aaKnown RBP17.19■□□□□ 0.34
RUNX1-216ENST00000482318 BPIFA4PQ86YQ2 179 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 CCDC140Q96MF4 163 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 CHRDL1Q9BU40 450 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 DERL1Q9BUN8 251 aa17.19■□□□□ 0.34
RUNX1-216ENST00000482318 USF2Q15853 346 aaPredicted RBP17.18■□□□□ 0.34
RUNX1-216ENST00000482318 LEMD1Q68G75 181 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 ZNF343Q6P1L6 599 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 USMG5Q96IX5 58 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 CTDSP1Q9GZU7 261 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 TMEM242Q9NWH2 141 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 CSMD1Q96PZ7 3565 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 PDZD2O15018 2839 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 CXorf65A6NEN9 183 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 BMPR1BO00238 502 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 TGOLN2O43493 480 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 TPPP2P59282 170 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 CLEC19AQ6UXS0 136 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 TMEM190Q8WZ59 177 aa17.18■□□□□ 0.34
RUNX1-216ENST00000482318 NOL4LQ96MY1 436 aaPredicted RBP17.18■□□□□ 0.34
RUNX1-216ENST00000482318 UNC79Q9P2D8 2635 aa17.17■□□□□ 0.34
RUNX1-216ENST00000482318 TEX15Q9BXT5 2789 aa17.17■□□□□ 0.34
RUNX1-216ENST00000482318 MT-ND4LP03901 98 aa17.17■□□□□ 0.34
RUNX1-216ENST00000482318 HIST1H1EP10412 219 aaKnown RBP17.17■□□□□ 0.34
RUNX1-216ENST00000482318 CRYBB3P26998 211 aa17.17■□□□□ 0.34
RUNX1-216ENST00000482318 RABAC1Q9UI14 185 aa17.17■□□□□ 0.34
RUNX1-216ENST00000482318 ZNF98A6NK75 572 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 C9JCJ5 164 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 RELQ04864 619 aaPredicted RBP17.16■□□□□ 0.34
RUNX1-216ENST00000482318 OR4F17Q8NGA8 305 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 BLNKQ8WV28 456 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 ELOVL1Q9BW60 279 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 RPL35P42766 123 aaKnown RBP17.16■□□□□ 0.34
RUNX1-216ENST00000482318 Q6ZS46 218 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 ZNF329Q86UD4 541 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 GNB4Q9HAV0 340 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 LY96Q9Y6Y9 160 aa17.16■□□□□ 0.34
RUNX1-216ENST00000482318 HELTA6NFD8 242 aa17.15■□□□□ 0.34
RUNX1-216ENST00000482318 HOXA3O43365 443 aaPredicted RBP17.15■□□□□ 0.34
RUNX1-216ENST00000482318 IGLV1-40P01703 118 aa17.15■□□□□ 0.34
RUNX1-216ENST00000482318 RANP62826 216 aaKnown RBP17.15■□□□□ 0.34
RUNX1-216ENST00000482318 LINC01551Q86U37 167 aa17.15■□□□□ 0.34
RUNX1-216ENST00000482318 C2CD4CQ8TF44 421 aa17.15■□□□□ 0.34
RUNX1-216ENST00000482318 PRSS22Q9GZN4 317 aa17.15■□□□□ 0.34
RUNX1-216ENST00000482318 CCDC168Q8NDH2 2452 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 A0A0G2JLM5 398 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 CLDN34H7C241 214 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 PF4V1P10720 104 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 MYCNOSP40205 109 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 CFHR3Q02985 330 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 RNF212Q495C1 297 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 HIST1H2BAQ96A08 127 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 NPFFR1Q9GZQ6 430 aa17.14■□□□□ 0.33
RUNX1-216ENST00000482318 COLCA2A8K830 154 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 CD5LO43866 347 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 TOMM20LQ6UXN7 152 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 ISOC2Q96AB3 205 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 ANAPC16Q96DE5 110 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 ZFHX3Q15911 3703 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 TRBV20OR9-2A0A075B6H5 130 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 RAB9AP51151 201 aa17.13■□□□□ 0.33
RUNX1-216ENST00000482318 ITPR2Q14571 2701 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 TMEM89A2RUT3 159 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 CD99P14209 185 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 SRP14P37108 136 aaKnown RBP17.12■□□□□ 0.33
RUNX1-216ENST00000482318 GNG4P50150 75 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 CNN1P51911 297 aaKnown RBP17.12■□□□□ 0.33
RUNX1-216ENST00000482318 ZFAND3Q9H8U3 227 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 ZNF586Q9NXT0 402 aa17.12■□□□□ 0.33
RUNX1-216ENST00000482318 PGPA6NDG6 321 aa17.11■□□□□ 0.33
RUNX1-216ENST00000482318 PEX7O00628 323 aa17.11■□□□□ 0.33
RUNX1-216ENST00000482318 SLC25A5P05141 298 aaKnown RBP17.11■□□□□ 0.33
RUNX1-216ENST00000482318 IGLC2P0DOY2 106 aa17.11■□□□□ 0.33
RUNX1-216ENST00000482318 RPL7P18124 248 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms