RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 MMP23AO75900 390 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMPD4-218ENST00000482171 Q6ZSR3 168 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 FAM169BQ8N8A8 192 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 MEGF9Q9H1U4 602 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 OSTCQ9NRP0 149 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 MUC21Q5SSG8 566 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 Q6ZWC4 215 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 PLXNB1O43157 2135 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 APOHP02749 345 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-218ENST00000482171 TSPOP30536 169 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 TMEM144Q7Z5S9 345 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 C18orf15Q96N68 181 aa9.23□□□□□ -0.93
SMPD4-218ENST00000482171 SMAD7O15105 426 aaKnown RBP9.22□□□□□ -0.93
SMPD4-218ENST00000482171 TGFAP01135 160 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 LMO1P25800 156 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 GNG5P63218 68 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 TWIST1Q15672 202 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 KLF17Q5JT82 389 aaPredicted RBP9.22□□□□□ -0.93
SMPD4-218ENST00000482171 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 WNT2P09544 360 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 PYYP10082 97 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 RPL7P18124 248 aaKnown RBP9.22□□□□□ -0.93
SMPD4-218ENST00000482171 GPR183P32249 361 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 PRCDQ00LT1 54 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 SEM1Q6ZVN7 128 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 SPOCK3Q9BQ16 436 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 C19orf24Q9BVV8 132 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 H3BVH4 76 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 MCRIP2Q9BUT9 160 aaKnown RBP9.22□□□□□ -0.93
SMPD4-218ENST00000482171 SPCS1Q9Y6A9 102 aa9.22□□□□□ -0.93
SMPD4-218ENST00000482171 hDV102S1A0JD36 115 aa9.21□□□□□ -0.93
SMPD4-218ENST00000482171 NBR2O15453 112 aa9.21□□□□□ -0.93
SMPD4-218ENST00000482171 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.93
SMPD4-218ENST00000482171 LOC107984156A0A0G2JMH3 177 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 C7orf71A4D174 169 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 CD69Q07108 199 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 ARL17AQ8IVW1 177 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 ARPC1AQ92747 370 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 MRPL32Q9BYC8 188 aaKnown RBP9.21□□□□□ -0.94
SMPD4-218ENST00000482171 USP9XQ93008 2570 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-218ENST00000482171 TRANK1O15050 2925 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 ATP5IP56385 69 aaPredicted RBP9.21□□□□□ -0.94
SMPD4-218ENST00000482171 PRSS8Q16651 343 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 C11orf53Q8IXP5 236 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 ZNF114Q8NC26 417 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 LRP4O75096 1905 aa9.21□□□□□ -0.94
SMPD4-218ENST00000482171 IGHV3-11P01762 117 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 ZNF134P52741 427 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 XIRP2A4UGR9 3374 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 CEACAM4O75871 244 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 PSG1P11464 419 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 RELQ04864 619 aaPredicted RBP9.2□□□□□ -0.94
SMPD4-218ENST00000482171 Q8NFD4 153 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 MYOZ3Q8TDC0 251 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 MGST2Q99735 147 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 IGLV3-9A0A075B6K5 115 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 TRAV5A0A0B4J249 113 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 F5H697 171 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 Q6ZVH6 145 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 ORAOV1Q8WV07 137 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 C21orf62Q9NYP8 219 aa9.2□□□□□ -0.94
SMPD4-218ENST00000482171 SH2D7A6NKC9 451 aaPredicted RBP9.19□□□□□ -0.94
SMPD4-218ENST00000482171 C15orf62A8K5M9 175 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 SLC25A48Q6ZT89 311 aaKnown RBP9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TMEM219Q86XT9 240 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 ZNF414Q96IQ9 312 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 BPESC1Q9GZL8 116 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 IGHV1-3A0A0C4DH29 117 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 H0YJW9 148 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TRGV3P03979 118 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 BRD3OSQ6XYD6 125 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 CACNG8Q8WXS5 425 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 RPP21Q9H633 154 aaKnown RBP9.19□□□□□ -0.94
SMPD4-218ENST00000482171 COX11Q9Y6N1 276 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 DYSFO75923 2080 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 A0A087X0K7 114 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 NDUFS7O75251 213 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TYMSP04818 313 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 PSMB2P49721 201 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TPTE2P1Q5T6R2 138 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 OR52E5Q8NH55 327 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 CX3CL1P78423 397 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 HAPLN4Q86UW8 402 aa9.19□□□□□ -0.94
SMPD4-218ENST00000482171 STPG4Q8N801 248 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms