RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 CNIH1O95406 144 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 IGLC1P0CG04 106 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 PSG1P11464 419 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 RNASEKQ6P5S7 137 aaKnown RBP12.24□□□□□ -0.45
C9orf3-218ENST00000482056 OR8B3Q8NGG8 313 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 OR8B2Q96RD0 313 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 SLC25A39Q9BZJ4 359 aaPredicted RBP12.24□□□□□ -0.45
C9orf3-218ENST00000482056 MALRD1Q5VYJ5 2156 aa12.24□□□□□ -0.45
C9orf3-218ENST00000482056 FAM231BA6NCW3 169 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 CTRLP40313 264 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 NBL1P41271 181 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 PRR30Q53SZ7 412 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-218ENST00000482056 LEMD1Q68G75 181 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 TCF24Q7RTU0 167 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 MUC15Q8N387 334 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 SSBP4Q9BWG4 385 aaPredicted RBP12.23□□□□□ -0.45
C9orf3-218ENST00000482056 ACACAQ13085 2346 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 C19orf71A6NCJ1 209 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 I3L2K1 104 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 RBPMS2Q6ZRY4 209 aaKnown RBP12.23□□□□□ -0.45
C9orf3-218ENST00000482056 LHFPL4Q7Z7J7 247 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 Q86TA4 180 aa12.23□□□□□ -0.45
C9orf3-218ENST00000482056 ANKRD11Q6UB99 2663 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-218ENST00000482056 FAM181BA6NEQ2 426 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 LIPFP07098 398 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-218ENST00000482056 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 SCNM1Q9BWG6 230 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 WNT10AQ9GZT5 417 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 GSX1Q9H4S2 264 aaPredicted RBP12.22□□□□□ -0.45
C9orf3-218ENST00000482056 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
C9orf3-218ENST00000482056 LYNX1G3V0Z9 82 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 H3BTX0 84 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 LYNX1P0DP58 116 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 BTF3P20290 206 aaKnown RBP12.21□□□□□ -0.45
C9orf3-218ENST00000482056 DLX1P56177 255 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 PGLYRP4Q96LB8 373 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 TXN2Q99757 166 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 MGAQ8IWI9 3026 aa12.21□□□□□ -0.45
C9orf3-218ENST00000482056 TRBV6-1A0A0K0K1D8 114 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 C20orf202A1L168 122 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 LY6LH3BQJ8 138 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 K7EQM0 130 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 ZNF25P17030 456 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-218ENST00000482056 G0S2P27469 103 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 COL8A1P27658 744 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.46
C9orf3-218ENST00000482056 BPIFA4PQ86YQ2 179 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 OR4F17Q8NGA8 305 aa12.21□□□□□ -0.46
C9orf3-218ENST00000482056 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 CEACAM3P40198 252 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 BATFQ16520 125 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 COL5A1-AS1Q5SY13 56 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 LINC00322Q6ZN03 302 aaPredicted RBP12.2□□□□□ -0.46
C9orf3-218ENST00000482056 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
C9orf3-218ENST00000482056 RIF1Q5UIP0 2472 aaKnown RBP12.2□□□□□ -0.46
C9orf3-218ENST00000482056 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 CHEK1O14757 476 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 HTR1DP28221 377 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
C9orf3-218ENST00000482056 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 PRNTQ86SH4 94 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 LINC01560Q8TB33 94 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
C9orf3-218ENST00000482056 NPIPB6E9PJ23 425 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 K7ENP7 123 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 TIMM23O14925 209 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 ZNF124Q15973 351 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
C9orf3-218ENST00000482056 CYB5R2Q6BCY4 276 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 Q6ZN92 141 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 SHANK2-AS3Q9BTD1 123 aa12.19□□□□□ -0.46
C9orf3-218ENST00000482056 NBR2O15453 112 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 POLEQ07864 2286 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 LY6G5BQ8NDX9 201 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 TIMD4Q96H15 378 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 RAB1BQ9H0U4 201 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 FAM90A27PA6NNH2 459 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 HOXB4P17483 251 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-218ENST00000482056 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 TMEM75Q8N9X5 138 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 ZFP30Q9Y2G7 519 aa12.18□□□□□ -0.46
C9orf3-218ENST00000482056 TRBV19A0A075B6N1 114 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 TRAV30A0A087WSZ9 112 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 H3BRN7 92 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 K7EIM0 57 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 FOXC1Q12948 553 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 GAGE1Q13065 139 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 EXOC3-AS1Q8N2X6 119 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 TMEM70Q9BUB7 260 aa12.17□□□□□ -0.46
C9orf3-218ENST00000482056 HAX1O00165 279 aa12.16□□□□□ -0.46
C9orf3-218ENST00000482056 FOSL1P15407 271 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms