RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PRNDQ9UKY0 176 aa9.15□□□□□ -0.95
HPS4-212ENST00000481910 UFC1Q9Y3C8 167 aa9.15□□□□□ -0.95
HPS4-212ENST00000481910 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 BCL2L11O43521 198 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 IGHG2P01859 326 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 ABHD5Q8WTS1 349 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 CIB3Q96Q77 187 aaPredicted RBP9.14□□□□□ -0.95
HPS4-212ENST00000481910 ASCL2Q99929 193 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 ZNF702PQ9H963 129 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 FKBP11Q9NYL4 201 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 CACNG5Q9UF02 275 aa9.14□□□□□ -0.95
HPS4-212ENST00000481910 C13orf42A0A1B0GVH6 325 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 C15orf61A6NNL5 157 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 MYOD1P15172 320 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 PLP1P60201 277 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 C10orf55Q5SWW7 151 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 OR2T6Q8NHC8 308 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 ARPC1AQ92747 370 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 PSMG3Q9BT73 122 aaPredicted RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 FAM103A1Q9BTL3 118 aaKnown RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 TET2Q6N021 2002 aaPredicted RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 CUBNO60494 3623 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 SETD2Q9BYW2 2564 aaPredicted RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 A0A1B0GU03 582 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 MSGN1A6NI15 193 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 OR2C1O95371 312 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 SNCAP37840 140 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 AWAT1Q58HT5 328 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 CST9LP1Q5W188 147 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 ZNF429Q86V71 674 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 Q8N2B8 174 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 SRSF12Q8WXF0 261 aaKnown RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 QTRT1Q9BXR0 403 aaKnown RBP9.13□□□□□ -0.95
HPS4-212ENST00000481910 PARP11Q9NR21 331 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 TMEM14BQ9NUH8 114 aa9.13□□□□□ -0.95
HPS4-212ENST00000481910 TEX50A0A1B0GTY4 177 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 GAGE12BA1L429 117 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 E5RGE8 158 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 ATP6V0E1O15342 81 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 SLC25A6P12236 298 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 RPL27AP46776 148 aaKnown RBP9.12□□□□□ -0.95
HPS4-212ENST00000481910 S100A10P60903 97 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 NDPQ00604 133 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 RUNX1Q01196 453 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 C2CD3Q4AC94 2353 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 OR5B3Q8NH48 314 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 OR10C1Q96KK4 312 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 SPIN2AQ99865 258 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 SPIN2BQ9BPZ2 258 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 SMDT1Q9H4I9 107 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 LINC00527Q9UJ94 153 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 PSG8Q9UQ74 426 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 FOXA2Q9Y261 457 aaPredicted RBP9.12□□□□□ -0.95
HPS4-212ENST00000481910 ZNF257Q9Y2Q1 563 aa9.12□□□□□ -0.95
HPS4-212ENST00000481910 E7EUB6 86 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 ST8SIA3O43173 380 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 NXPH3O95157 252 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 TMEM50AO95807 157 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 VDAC2P45880 294 aaPredicted RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 C2orf68Q2NKX9 166 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 IAH1Q2TAA2 248 aaPredicted RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 FAM78BQ5VT40 261 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 LFNGQ8NES3 379 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 OR1L8Q8NGR8 309 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 OR1P1Q8NH06 330 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 SGMS2Q8NHU3 365 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 MRAPQ8TCY5 172 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 NDUFA7O95182 113 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 IGF1P05019 195 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 APELAP0DMC3 54 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 EGR2P11161 476 aaPredicted RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 TFPI2P48307 235 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 HSPE1P61604 102 aaKnown RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 TMEM267Q0VDI3 215 aaPredicted RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.11□□□□□ -0.95
HPS4-212ENST00000481910 OR4F5Q8NH21 305 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 LINC01006Q8NI28 216 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 C16orf95Q9H693 158 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 SERTAD4Q9NUC0 356 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 WSB1Q9Y6I7 421 aa9.11□□□□□ -0.95
HPS4-212ENST00000481910 PITX3O75364 302 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 SLC25A4P12235 298 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 AKR1C1Q04828 323 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 ECSCRQ19T08 205 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 SPINK9Q5DT21 86 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 UNQ5815/PRO19632Q6UWF5 114 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 RNF152Q8N8N0 203 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 NDUFA4L2Q9NRX3 87 aa9.1□□□□□ -0.95
HPS4-212ENST00000481910 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
HPS4-212ENST00000481910 FXYD6-FXYD2A0A087WZ82 144 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 TRAV41A0A0B4J266 112 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 A0A1B0GW64 132 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 CGB1A6NKQ9 187 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 G3V318 75 aa9.09□□□□□ -0.95
HPS4-212ENST00000481910 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms