RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 A0A087X0K7 114 aa11.54□□□□□ -0.56
CCDC78-211ENST00000481804 TCRAP04437 139 aa11.54□□□□□ -0.56
CCDC78-211ENST00000481804 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
CCDC78-211ENST00000481804 FAM169BQ8N8A8 192 aa11.54□□□□□ -0.56
CCDC78-211ENST00000481804 TPSG1Q9NRR2 321 aa11.54□□□□□ -0.56
CCDC78-211ENST00000481804 NBASA2RRP1 2371 aa11.54□□□□□ -0.56
CCDC78-211ENST00000481804 LOC102724200A0A096LPH7 203 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-211ENST00000481804 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 HLA-DRB1P01911 266 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 FAM120AOSQ5T036 256 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 ZNF474Q6S9Z5 364 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-211ENST00000481804 CIARTQ8N365 385 aaPredicted RBP11.53□□□□□ -0.56
CCDC78-211ENST00000481804 IGLV3-9A0A075B6K5 115 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 TAX1BP3O14907 124 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 THAP8Q8NA92 274 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 TMUB1Q9BVT8 246 aa11.53□□□□□ -0.56
CCDC78-211ENST00000481804 SMG1Q96Q15 3661 aaKnown RBP11.53□□□□□ -0.56
CCDC78-211ENST00000481804 C22orf46C9J442 243 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 MYCNOSP40205 109 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 CDX4O14627 284 aaPredicted RBP11.52□□□□□ -0.57
CCDC78-211ENST00000481804 PET117Q6UWS5 81 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 FA2HQ7L5A8 372 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 PRSS3P2Q8NHM4 247 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.57
CCDC78-211ENST00000481804 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 CRXO43186 299 aaPredicted RBP11.51□□□□□ -0.57
CCDC78-211ENST00000481804 TNFRSF1AP19438 455 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 ARF6P62330 175 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 DEFB109BQ30KR1 87 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 CT83Q5H943 113 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 SRSF12Q8WXF0 261 aaKnown RBP11.51□□□□□ -0.57
CCDC78-211ENST00000481804 CCL17Q92583 94 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 MLST8Q9BVC4 326 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 AP5S1Q9NUS5 200 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 LTAP01374 205 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 SP9P0CG40 484 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 TMEM200BQ69YZ2 307 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 ARL6IP6Q8N6S5 226 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 AP1S3Q96PC3 154 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 LINC00574Q9H8X3 128 aa11.51□□□□□ -0.57
CCDC78-211ENST00000481804 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
CCDC78-211ENST00000481804 APOHP02749 345 aaPredicted RBP11.5□□□□□ -0.57
CCDC78-211ENST00000481804 SEM1Q6ZVN7 128 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 BPIFA4PQ86YQ2 179 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 EXOC3-AS1Q8N2X6 119 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 WT1P19544 449 aaPredicted RBP11.5□□□□□ -0.57
CCDC78-211ENST00000481804 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
CCDC78-211ENST00000481804 TCTAP57738 103 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 FAM27E3Q08E93 113 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 TMEM186Q96B77 213 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 NDUFB3O43676 98 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 FSTL3O95633 263 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 GPR183P32249 361 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 MEF2CQ06413 473 aaPredicted RBP11.5□□□□□ -0.57
CCDC78-211ENST00000481804 RUSC1-AS1Q66K80 236 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 ASCL2Q99929 193 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
CCDC78-211ENST00000481804 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 C19orf71A6NCJ1 209 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 RBP4P02753 201 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 HIST1H1AQ02539 215 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-211ENST00000481804 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 GFRA4Q9GZZ7 299 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 ATMQ13315 3056 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 PIEZO2Q9H5I5 2752 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 INS-IGF2F8WCM5 200 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 CSN1S1P47710 185 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 UQCRFS1P47985 274 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 OCIAD2Q56VL3 154 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 Q86TA4 180 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 TRGV9Q99603 122 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 C1RLQ9NZP8 487 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 POLEQ07864 2286 aa11.49□□□□□ -0.57
CCDC78-211ENST00000481804 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 PSG9Q00887 426 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 RIGQ13278 110 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 RITA1Q96K30 269 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 MBD3L4A6NDZ8 208 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-211ENST00000481804 MBD3L3A6NE82 208 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-211ENST00000481804 MBD3L5A6NJ08 208 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-211ENST00000481804 M0R296 226 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 GP9P14770 177 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 CD40P25942 277 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 SMIM15Q7Z3B0 74 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 MBD3L2Q8NHZ7 208 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-211ENST00000481804 C8orf46Q8TAG6 207 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 LOC389332A0A1B0GUA5 103 aa11.48□□□□□ -0.57
CCDC78-211ENST00000481804 PPIAL4DF5H284 164 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms