RNA–Protein interactions for RNA: ENST00000480598.1

LIMS4-202, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-202ENST00000480598 C4orf46Q504U0 113 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 LINC00052Q96N35 136 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 TBC1D24Q9ULP9 559 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 BIRC6Q9NR09 4857 aa10.79□□□□□ -0.68
LIMS4-202ENST00000480598 ELOA3CA0A087WX78 387 aaPredicted RBP10.78□□□□□ -0.68
LIMS4-202ENST00000480598 CENPXA8MT69 81 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 SSSCA1O60232 199 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 IFNA21P01568 189 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 IGKV3-20P01619 116 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 MIFP14174 115 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 C1orf194Q5T5A4 169 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 OR8I2Q8N0Y5 310 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 C7orf50Q9BRJ6 194 aaKnown RBP10.78□□□□□ -0.68
LIMS4-202ENST00000480598 PSENENQ9NZ42 101 aa10.78□□□□□ -0.68
LIMS4-202ENST00000480598 SMCO3A2RU48 225 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 CCNKO75909 580 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 SCGB1D2O95969 90 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 ORM2P19652 201 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 ID1P41134 155 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 PSMB3P49720 205 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 FXYD7P58549 80 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 SLC25A32Q9H2D1 315 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
LIMS4-202ENST00000480598 VPS13DQ5THJ4 4388 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 ZNF98A6NK75 572 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 PMS2P5A8MQ11 134 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 PLA2G10O15496 165 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 CFDP00746 253 aaPredicted RBP10.76□□□□□ -0.69
LIMS4-202ENST00000480598 PAX9P55771 341 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 NUTF2P61970 127 aaKnown RBP10.76□□□□□ -0.69
LIMS4-202ENST00000480598 BPIFCQ8NFQ6 507 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 OR1B1Q8NGR6 318 aa10.76□□□□□ -0.69
LIMS4-202ENST00000480598 SAV1Q9H4B6 383 aaPredicted RBP10.76□□□□□ -0.69
LIMS4-202ENST00000480598 F6UB75 175 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 METTL15P1P0C7V9 234 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 HLA-DMBP28068 263 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 RRAS2P62070 204 aaPredicted RBP10.75□□□□□ -0.69
LIMS4-202ENST00000480598 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
LIMS4-202ENST00000480598 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 CYP2G1PQ6ZSU1 146 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 TMEM144Q7Z5S9 345 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 ZBTB8BQ8NAP8 495 aaPredicted RBP10.75□□□□□ -0.69
LIMS4-202ENST00000480598 C2CD4CQ8TF44 421 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 MITD1Q8WV92 249 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 SMIM8Q96KF7 97 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 C17orf77Q96MU5 243 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 TMEM147Q9BVK8 224 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 C20orf85Q9H1P6 137 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 HRH4Q9H3N8 390 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 DOK5Q9P104 306 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 CELA1Q9UNI1 258 aa10.75□□□□□ -0.69
LIMS4-202ENST00000480598 ISLRO14498 428 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 LYRM1O43325 122 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 DEDDO75618 318 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 GALR1P47211 349 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 TMEM14EPQ6UXP3 125 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 Q6ZTC4 211 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 ZNF767PQ75MW2 155 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 RPP25LQ8N5L8 163 aaKnown RBP10.74□□□□□ -0.69
LIMS4-202ENST00000480598 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 RSG1Q9BU20 258 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 SCRT1Q9BWW7 348 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 NDUFA13Q9P0J0 144 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 GSKIPQ9P0R6 139 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 SLC45A2Q9UMX9 530 aa10.74□□□□□ -0.69
LIMS4-202ENST00000480598 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
LIMS4-202ENST00000480598 IGLL5B9A064 214 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 CCSO14618 274 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 IL5P05113 134 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 ZNF709Q8N972 641 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 SLC35B3Q9H1N7 401 aa10.73□□□□□ -0.69
LIMS4-202ENST00000480598 TRAV6A0A075B6T7 132 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 IGHV3OR16-12A0A075B7B8 117 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 C11orf94C9JXX5 98 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 H3BRN7 92 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 MEOX2P50222 304 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 DLK1P80370 383 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 FAM78BQ5VT40 261 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 ZNF705AQ6ZN79 300 aaPredicted RBP10.72□□□□□ -0.69
LIMS4-202ENST00000480598 SLC25A39Q9BZJ4 359 aaPredicted RBP10.72□□□□□ -0.69
LIMS4-202ENST00000480598 FRAS1Q86XX4 4008 aa10.72□□□□□ -0.69
LIMS4-202ENST00000480598 A0A0J9YX75 114 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 TSC22D2O75157 780 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 MBPP02686 304 aaPredicted RBP10.71□□□□□ -0.69
LIMS4-202ENST00000480598 TCRBP04435 133 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 LINC00869P0C866 280 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 ARL16Q0P5N6 197 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 C12orf74Q32Q52 190 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 SAMD13Q5VXD3 122 aa10.71□□□□□ -0.69
LIMS4-202ENST00000480598 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms