RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TP53TG1Q9Y2A0 90 aa10.64□□□□□ -0.71
ATG4B-218ENST00000479554 EPPK1P58107 5090 aaKnown RBP10.63□□□□□ -0.71
ATG4B-218ENST00000479554 IGHV3-49A0A0A0MS15 119 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 CHEK1O14757 476 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 ATP6V1G1O75348 118 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 DFFBO76075 338 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 CST7O76096 145 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 SNCAP37840 140 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 HBG1P69891 147 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 HBG2P69892 147 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 RPP30P78346 268 aaKnown RBP10.63□□□□□ -0.71
ATG4B-218ENST00000479554 ZNF266Q14584 549 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 DEFB135Q30KP9 77 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 SPANXN5Q5MJ07 72 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 TMEM14EPQ6UXP3 125 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 Q6ZWC4 215 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 OR5C1Q8NGR4 320 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
ATG4B-218ENST00000479554 STRAPQ9Y3F4 350 aaKnown RBP10.63□□□□□ -0.71
ATG4B-218ENST00000479554 KIR2DL5BA0A0G2JN68 375 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 KIR2DL5BA0A0G2JPC4 375 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 LINC00862A6NCI5 91 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 UBE2CO00762 179 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 SPRY2O43597 315 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 METTL15P1P0C7V9 234 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 BMI1P35226 326 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 NPBWR1P48145 328 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 HOXA1P49639 335 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-218ENST00000479554 CLINT1Q14677 625 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 WFDC3Q8IUB2 231 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 SLC7A5P1Q8MH63 180 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 KIR2DL5AQ8N109 375 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 KIR2DL5BQ8NHK3 375 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 ATP5SQ99766 215 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 GINS3Q9BRX5 216 aa10.62□□□□□ -0.71
ATG4B-218ENST00000479554 IGKV3-7A0A075B6H7 116 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 INS-IGF2F8WCM5 200 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 NMBP08949 121 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 RPL35AP18077 110 aaKnown RBP10.61□□□□□ -0.71
ATG4B-218ENST00000479554 TFPI2P48307 235 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATG4B-218ENST00000479554 ATP6V1FQ16864 119 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 TMEM217Q8N7C4 229 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 ENY2Q9NPA8 101 aa10.61□□□□□ -0.71
ATG4B-218ENST00000479554 HEYLQ9NQ87 328 aaPredicted RBP10.61□□□□□ -0.71
ATG4B-218ENST00000479554 IGHV3OR16-13A0A075B7E8 117 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 IGHV3-74A0A0B4J1X5 117 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 A0A0J9YWU9 116 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 CXorf65A6NEN9 183 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 CORTO00230 105 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 IFNA5P01569 189 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 SEC11BP0C7V7 166 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 CMC4P56277 68 aaPredicted RBP10.6□□□□□ -0.71
ATG4B-218ENST00000479554 PMS2P11Q13670 270 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 FAM74A1Q5RGS3 127 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 TOMM20LQ6UXN7 152 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 ZNF600Q6ZNG1 722 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 RNF141Q8WVD5 230 aa10.6□□□□□ -0.71
ATG4B-218ENST00000479554 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
ATG4B-218ENST00000479554 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-218ENST00000479554 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 SLC38A11Q08AI6 406 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 ARL16Q0P5N6 197 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 TCF24Q7RTU0 167 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 LILRB2Q8N423 598 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 GBGT1Q8N5D6 347 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 PCNPQ8WW12 178 aaKnown RBP10.59□□□□□ -0.71
ATG4B-218ENST00000479554 RNF183Q96D59 192 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 ZFAND3Q9H8U3 227 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 MAP6D1Q9H9H5 199 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
ATG4B-218ENST00000479554 PUS1Q9Y606 427 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATG4B-218ENST00000479554 PMS2P5A8MQ11 134 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 IFNA10P01566 189 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 CD5P06127 495 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 SPP1P10451 314 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 OPRK1P41145 380 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 RAB11AP62491 216 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 ZNF124Q15973 351 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 FAM90A2PQ658T7 463 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 OR8G2PQ6IF36 304 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 SCGB1C1Q8TD33 95 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 GNPNAT1Q96EK6 184 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-218ENST00000479554 PARD6GQ9BYG4 376 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-218ENST00000479554 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
ATG4B-218ENST00000479554 IGHV3-66A0A0C4DH42 116 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 SCGB2A1O75556 95 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 APOHP02749 345 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-218ENST00000479554 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 SULT1A2P50226 295 aa10.57□□□□□ -0.72
ATG4B-218ENST00000479554 SAT2Q96F10 170 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-218ENST00000479554 TMEM147Q9BVK8 224 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms