RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZGRF1Q86YA3 2104 aa19.58■□□□□ 0.72
SYNGAP1-206ENST00000479510 OR8B3Q8NGG8 313 aa19.58■□□□□ 0.72
SYNGAP1-206ENST00000479510 OR8B2Q96RD0 313 aa19.58■□□□□ 0.72
SYNGAP1-206ENST00000479510 RASL11BQ9BPW5 248 aa19.58■□□□□ 0.72
SYNGAP1-206ENST00000479510 M0R2Z0 102 aa19.57■□□□□ 0.72
SYNGAP1-206ENST00000479510 LYZP61626 148 aa19.57■□□□□ 0.72
SYNGAP1-206ENST00000479510 GAGE1Q13065 139 aa19.57■□□□□ 0.72
SYNGAP1-206ENST00000479510 LINC00322Q6ZN03 302 aaPredicted RBP19.57■□□□□ 0.72
SYNGAP1-206ENST00000479510 FBXL15Q9H469 300 aa19.57■□□□□ 0.72
SYNGAP1-206ENST00000479510 TCF24Q7RTU0 167 aa19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 GTSF1Q8WW33 167 aa19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 SSBP4Q9BWG4 385 aaPredicted RBP19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 BTF3P20290 206 aaKnown RBP19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 CHCHD1Q96BP2 118 aaKnown RBP19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 SCNM1Q9BWG6 230 aa19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 ARFGEF3Q5TH69 2177 aa19.56■□□□□ 0.72
SYNGAP1-206ENST00000479510 IGHV3-21A0A0B4J1V1 117 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 APELAP0DMC3 54 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 COL5A1-AS1Q5SY13 56 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 RNASEKQ6P5S7 137 aaKnown RBP19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 C16orf54Q6UWD8 224 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 LYPD1Q8N2G4 141 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 LY6G5BQ8NDX9 201 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 OR2D3Q8NGH3 330 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 SGK494Q96LW2 274 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 ZNF25P17030 456 aaPredicted RBP19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 GPR6P46095 362 aaPredicted RBP19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 LEMD1Q68G75 181 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 MUC15Q8N387 334 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 WNT10AQ9GZT5 417 aa19.55■□□□□ 0.72
SYNGAP1-206ENST00000479510 IGKV1-17P01599 117 aa19.54■□□□□ 0.72
SYNGAP1-206ENST00000479510 COX7A1P24310 79 aa19.54■□□□□ 0.72
SYNGAP1-206ENST00000479510 FBXL19-AS1Q494R0 122 aa19.54■□□□□ 0.72
SYNGAP1-206ENST00000479510 SHANK2-AS3Q9BTD1 123 aa19.54■□□□□ 0.72
SYNGAP1-206ENST00000479510 C1RLQ9NZP8 487 aa19.54■□□□□ 0.72
SYNGAP1-206ENST00000479510 LIPFP07098 398 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 FOXA3P55318 350 aaPredicted RBP19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 PLGLAQ15195 96 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 GSX1Q9H4S2 264 aaPredicted RBP19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 CFAP47Q6ZTR5 3102 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 IGLV2-11P01706 119 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 FOSL1P15407 271 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 PRR30Q53SZ7 412 aaPredicted RBP19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 LHFPL4Q7Z7J7 247 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 NDFIP1Q9BT67 221 aa19.53■□□□□ 0.72
SYNGAP1-206ENST00000479510 TRAV9-2A0A087WT02 112 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 C2orf70A6NJV1 201 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 S100A7AQ86SG5 101 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 BPIFA4PQ86YQ2 179 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 LPAR2Q9HBW0 351 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 ZFP30Q9Y2G7 519 aa19.52■□□□□ 0.72
SYNGAP1-206ENST00000479510 HAX1O00165 279 aa19.52■□□□□ 0.71
SYNGAP1-206ENST00000479510 EBLN2Q6P2I7 272 aa19.52■□□□□ 0.71
SYNGAP1-206ENST00000479510 TMEM75Q8N9X5 138 aa19.52■□□□□ 0.71
SYNGAP1-206ENST00000479510 PGLYRP4Q96LB8 373 aa19.52■□□□□ 0.71
SYNGAP1-206ENST00000479510 TXN2Q99757 166 aa19.52■□□□□ 0.71
SYNGAP1-206ENST00000479510 ROS1P08922 2347 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 K7EIM0 57 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 DLEU1O43261 78 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 G0S2P27469 103 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 COL8A1P27658 744 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 TMEM208Q9BTX3 173 aa19.51■□□□□ 0.71
SYNGAP1-206ENST00000479510 TRBV19A0A075B6N1 114 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 LYNX1G3V0Z9 82 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 H3BRN7 92 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 PLXNB1O43157 2135 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 CNIH1O95406 144 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 LYNX1P0DP58 116 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 HNRNPA3P51991 378 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 DLX1P56177 255 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 OR4F17Q8NGA8 305 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 OR11H6Q8NGC7 330 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 CEP250Q9BV73 2442 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 MALRD1Q5VYJ5 2156 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 H3BTX0 84 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 K7ENP7 123 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 Q6ZN92 141 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 NPBQ8NG41 125 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 URB1-AS1Q96HZ7 61 aa19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 MRPS16Q9Y3D3 137 aaKnown RBP19.5■□□□□ 0.71
SYNGAP1-206ENST00000479510 K7EQM0 130 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 CRXO43186 299 aaPredicted RBP19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 HTR1DP28221 377 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 ZNF672Q499Z4 452 aaPredicted RBP19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 GOLT1AQ6ZVE7 132 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 TMEM70Q9BUB7 260 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 RAB1BQ9H0U4 201 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 DPM3Q9P2X0 92 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 ZNF292O60281 2723 aa19.49■□□□□ 0.71
SYNGAP1-206ENST00000479510 LOC102724200A0A096LPH7 203 aaPredicted RBP19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 TIMM23O14925 209 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 NBR2O15453 112 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 CEACAM3P40198 252 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 TRAV30A0A087WSZ9 112 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 CHEK1O14757 476 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 ONECUT1Q9UBC0 465 aa19.48■□□□□ 0.71
SYNGAP1-206ENST00000479510 PKDREJQ9NTG1 2253 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 A0A1B0GW15 77 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 NDUFA3O95167 84 aa19.47■□□□□ 0.71
SYNGAP1-206ENST00000479510 APOHP02749 345 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms