RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TIGITQ495A1 244 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 Q56UQ5 140 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 FFAR4Q5NUL3 377 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 AKR1C8PQ5T2L2 129 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 TEX38Q6PEX7 206 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 COMMD1Q8N668 190 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 KLHDC1Q8N7A1 406 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 LINC01006Q8NI28 216 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 ZNF414Q96IQ9 312 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 TXN2Q99757 166 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 VSIRQ9H7M9 311 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 SLC39A9Q9NUM3 307 aa5.13□□□□□ -1.59
USP48-208ENST00000479177 TRAV30A0A087WSZ9 112 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 A0A0G2JLM5 398 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 TGOLN2O43493 480 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 GNG7O60262 68 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 SCGB2A1O75556 95 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 TOMM40O96008 361 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 TRBV12-3P01733 135 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 IGHV3-11P01762 117 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 FABP1P07148 127 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 CTSGP08311 255 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 NMBP08949 121 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 GATA2P23769 480 aaPredicted RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 FHITP49789 147 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 RAB5CP51148 216 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 PROK1P58294 105 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 YPEL3P61236 119 aaPredicted RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 BEAN1Q3B7T3 259 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 ACOT6Q3I5F7 207 aaPredicted RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 TMEM41BQ5BJD5 291 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 GCSAMLQ5JQS6 135 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 TCTEX1D4Q5JR98 221 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 ZNF343Q6P1L6 599 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 CLEC19AQ6UXS0 136 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 DPPA3Q6W0C5 159 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 ZNF491Q8N8L2 437 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 BPIFCQ8NFQ6 507 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 OR4F5Q8NH21 305 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 PCNPQ8WW12 178 aaKnown RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 CHRDL1Q9BU40 450 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 GNB4Q9HAV0 340 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 RPRMQ9NS64 109 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 GAR1Q9NY12 217 aaKnown RBP5.12□□□□□ -1.59
USP48-208ENST00000479177 VWFP04275 2813 aa5.12□□□□□ -1.59
USP48-208ENST00000479177 CLPSL1A2RUU4 121 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ZNF705EA8MWA4 302 aaPredicted RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 SEC14L6B5MCN3 397 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 PPP5D1E7EU14 171 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 BMPR1BO00238 502 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 NUPL2O15504 423 aaKnown RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 OR2C1O95371 312 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 MBP02144 154 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 CLEC3BP05452 202 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 LGALS1P09382 135 aaKnown RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 OR5G3P0C626 314 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 RD3LP0DJH9 198 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 PSG1P11464 419 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 M6PRP20645 277 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ARL3P36405 182 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 PLP1P60201 277 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ZNF616Q08AN1 781 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ZNF726P1Q15940 193 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 FAM209BQ5JX69 171 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 SPSB3Q6PJ21 355 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ZNF600Q6ZNG1 722 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 Q6ZRG5 221 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 SSX7Q7RTT5 188 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 ZNF575Q86XF7 245 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 RPP25LQ8N5L8 163 aaKnown RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 OR5AU1Q8NGC0 362 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 OR4X2Q8NGF9 303 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 FAM213BQ8TBF2 198 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 SAT2Q96F10 170 aaPredicted RBP5.11□□□□□ -1.59
USP48-208ENST00000479177 SLC25A22Q9H936 323 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 DOK5Q9P104 306 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 DKK2Q9UBU2 259 aa5.11□□□□□ -1.59
USP48-208ENST00000479177 CTXND1A0A1B0GTU2 59 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 WI2-2373I1.2A0A1W2PRP0 233 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 COX7A2P2O60397 106 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 IL4P05112 153 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 CDC34P49427 236 aaPredicted RBP5.1□□□□□ -1.59
USP48-208ENST00000479177 LYZP61626 148 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 RELQ04864 619 aaPredicted RBP5.1□□□□□ -1.59
USP48-208ENST00000479177 CLLU1Q5K131 121 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 PXDC1Q5TGL8 231 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 SPATA31B1PQ5VZV4 182 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 FAM122CQ6P4D5 195 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 PATE2Q6UY27 113 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 OR51G1Q8NGK1 321 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 OR10G4Q8NGN3 311 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 OR10G9Q8NGN4 311 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 OR10G7Q8NGN6 311 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 LRRC20Q8TCA0 184 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 TMEM37Q8WXS4 190 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 RNF125Q96EQ8 232 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 UBE2E2Q96LR5 201 aa5.1□□□□□ -1.59
USP48-208ENST00000479177 OR5B12Q96R08 314 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms