RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 WDR12Q9GZL7 423 aaKnown RBP17.03■□□□□ 0.32
C9orf3-215ENST00000478473 TSC22D2O75157 780 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 HLA-DRB4P13762 266 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 PSMB3P49720 205 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 PMS2P11Q13670 270 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 SAMD13Q5VXD3 122 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 TMEM182Q6ZP80 229 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-215ENST00000478473 BPIFCQ8NFQ6 507 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 HLA-DRB4X5D2U9 266 aa17.02■□□□□ 0.32
C9orf3-215ENST00000478473 ALMS1Q8TCU4 4167 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 K7EPK0 472 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 SSSCA1O60232 199 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 PLP1P60201 277 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 DLK1P80370 383 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 MFFQ9GZY8 342 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 RCL1Q9Y2P8 373 aaKnown RBP17.01■□□□□ 0.31
C9orf3-215ENST00000478473 X6R8D5 127 aa17.01■□□□□ 0.31
C9orf3-215ENST00000478473 ZNF98A6NK75 572 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 ISLRO14498 428 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 MIFP14174 115 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 ID1P41134 155 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 AKR1C1Q04828 323 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 OR8I2Q8N0Y5 310 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 C17orf77Q96MU5 243 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 C1QTNF4Q9BXJ3 329 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 HRH4Q9H3N8 390 aa17■□□□□ 0.31
C9orf3-215ENST00000478473 KLK5Q9Y337 293 aaPredicted RBP17■□□□□ 0.31
C9orf3-215ENST00000478473 S100A7P31151 101 aa16.99■□□□□ 0.31
C9orf3-215ENST00000478473 MEOX2P50222 304 aa16.99■□□□□ 0.31
C9orf3-215ENST00000478473 NUTF2P61970 127 aaKnown RBP16.99■□□□□ 0.31
C9orf3-215ENST00000478473 C11orf45Q8TAV5 145 aa16.99■□□□□ 0.31
C9orf3-215ENST00000478473 ZNF431Q8TF32 576 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-215ENST00000478473 PHLDA1Q8WV24 401 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-215ENST00000478473 S100ZQ8WXG8 99 aa16.99■□□□□ 0.31
C9orf3-215ENST00000478473 LINC00476Q8WZB0 136 aa16.99■□□□□ 0.31
C9orf3-215ENST00000478473 MBPP02686 304 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-215ENST00000478473 GATA2P23769 480 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-215ENST00000478473 SELENOTP62341 195 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 SPATA31B1PQ5VZV4 182 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 FOXI2Q6ZQN5 318 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 CYP2G1PQ6ZSU1 146 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 GPR82Q96P67 336 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 SAV1Q9H4B6 383 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-215ENST00000478473 NPVFQ9HCQ7 196 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 NUDT15Q9NV35 164 aa16.98■□□□□ 0.31
C9orf3-215ENST00000478473 C7orf66A4D0T2 115 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 A6NHS1 94 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 CCNKO75909 580 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 RBMY1A1P0DJD3 496 aaKnown RBP16.97■□□□□ 0.31
C9orf3-215ENST00000478473 RBMY1CP0DJD4 496 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 RBMY1FQ15415 496 aaKnown RBP16.97■□□□□ 0.31
C9orf3-215ENST00000478473 OR10P1Q8NGE3 313 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 PPP1R14BQ96C90 147 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 GGACTQ9BVM4 153 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 SLC25A32Q9H2D1 315 aa16.97■□□□□ 0.31
C9orf3-215ENST00000478473 HYDINQ4G0P3 5121 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 TRAV6A0A075B6T7 132 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 METTL15P1P0C7V9 234 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 GALR1P47211 349 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 GDF5OSQ5U4N7 250 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 TMEM147Q9BVK8 224 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 GSKIPQ9P0R6 139 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 TBC1D24Q9ULP9 559 aa16.96■□□□□ 0.31
C9orf3-215ENST00000478473 IGHV4-28A0A0C4DH34 117 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 A8MTW9 85 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 IL5P05113 134 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 ORM2P19652 201 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 NANOS2P60321 138 aaKnown RBP16.95■□□□□ 0.3
C9orf3-215ENST00000478473 ASAH1Q13510 395 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 OR1B1Q8NGR6 318 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 C11orf1Q9H5F2 150 aa16.95■□□□□ 0.3
C9orf3-215ENST00000478473 H3BRN7 92 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 DEDDO75618 318 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 SCGB1D2O95969 90 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 H2AFB2P0C5Z0 115 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 ARL16Q0P5N6 197 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 IL15RAQ13261 267 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 SHANK2-AS3Q9BTD1 123 aa16.94■□□□□ 0.3
C9orf3-215ENST00000478473 SLC25A39Q9BZJ4 359 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-215ENST00000478473 DEFB4AO15263 64 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF846Q147U1 533 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 TEPPQ6URK8 271 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF705AQ6ZN79 300 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-215ENST00000478473 C12orf45Q8N5I9 185 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-215ENST00000478473 LINC00052Q96N35 136 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 NEU1Q99519 415 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 SEC22CQ9BRL7 303 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 CLEC5AQ9NY25 188 aa16.93■□□□□ 0.3
C9orf3-215ENST00000478473 FAM240BA0A1B0GVZ2 78 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 SMCO3A2RU48 225 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 CCSO14618 274 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 PXDC1Q5TGL8 231 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF709Q8N972 641 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 RSG1Q9BU20 258 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 SLC25A22Q9H936 323 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 MGAT4CQ9UBM8 478 aa16.92■□□□□ 0.3
C9orf3-215ENST00000478473 ELOA3CA0A087WX78 387 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-215ENST00000478473 A0A0J9YX75 114 aa16.91■□□□□ 0.3
C9orf3-215ENST00000478473 ZNF705FA8MVS1 300 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms