RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 LSM6P62312 80 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 EIF5AP63241 154 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 IAH1Q2TAA2 248 aaPredicted RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 PTRHD1Q6GMV3 140 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 Q6Q795 121 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 PDZD9Q8IXQ8 264 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 OR6V1Q8N148 313 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 OR51A2Q8NGJ7 313 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 FAM172AQ8WUF8 416 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 C2orf50Q96LR7 162 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TMEM133Q9H2Q1 129 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 PSTPIP2Q9H939 334 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TVP23BQ9NYZ1 205 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 IDI2-AS1Q9NZ38 188 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 NOSIPQ9Y314 301 aaKnown RBP0.1□□□□□ -2.39
SYCP3-205ENST00000478238 TNCP24821 2201 aa0.1□□□□□ -2.39
SYCP3-205ENST00000478238 RTL1A6NKG5 1358 aa0.09□□□□□ -2.39
SYCP3-205ENST00000478238 MYH2Q9UKX2 1941 aa0.09□□□□□ -2.39
SYCP3-205ENST00000478238 ARHGEF11O15085 1522 aa0.09□□□□□ -2.39
SYCP3-205ENST00000478238 MEGF8Q7Z7M0 2845 aa0.09□□□□□ -2.39
SYCP3-205ENST00000478238 A0A0D9SG42 100 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 SMIM23A6NLE4 172 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 M0R378 163 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 NUPR1O60356 82 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 SPTBP11277 2137 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 HOXA6P31267 233 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 PIGPP57054 158 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 AP3S2P59780 193 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 ROMO1P60602 79 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 KRR1Q13601 381 aaKnown RBP0.09□□□□□ -2.4
SYCP3-205ENST00000478238 EDDM3AQ14507 147 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 LYRM7Q5U5X0 104 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 KRTAP26-1Q6PEX3 210 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 PLPP5Q8NEB5 264 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 OR11H6Q8NGC7 330 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 OR8J2Q8NGG1 315 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 OR10K1Q8NGX5 313 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 ITFG2Q969R8 447 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 ARL5BQ96KC2 179 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 LINC00052Q96N35 136 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 TP53RKQ96S44 253 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 GPER1Q99527 375 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 TRIM4Q9C037 500 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 TMEM126AQ9H061 195 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 GLTPQ9NZD2 209 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 ORMDL1Q9P0S3 153 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 PCTPQ9UKL6 214 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 TNFSF18Q9UNG2 199 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 CCDC144AA2RUR9 1427 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 COL24A1Q17RW2 1714 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 CECR2Q9BXF3 1484 aa0.09□□□□□ -2.4
SYCP3-205ENST00000478238 SSPOA2VEC9 5147 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 BCORL1Q5H9F3 1711 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 TNS3Q68CZ2 1445 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 TRAV10A0A0B4J240 114 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 F8W1H4 67 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 NDUFB3O43676 98 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 CST8O60676 142 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 IGLV3-1P01715 115 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 KRTAP2-3P0C7H8 128 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 ERP29P30040 261 aaKnown RBP0.08□□□□□ -2.4
SYCP3-205ENST00000478238 CEBPGP53567 150 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 MYL6P60660 151 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 HIST1H3AP68431 136 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 H3F3AP84243 136 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 CIRBPQ14011 172 aaKnown RBP0.08□□□□□ -2.4
SYCP3-205ENST00000478238 TMEM97Q5BJF2 176 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 HAGHLQ6PII5 290 aaPredicted RBP0.08□□□□□ -2.4
SYCP3-205ENST00000478238 C2orf82Q6UX34 121 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 C4orf22Q6V702 233 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 ZNF833PQ6ZTB9 187 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 OR5D14Q8NGL3 314 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 Q8TAT8 98 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 PPP1R14BQ96C90 147 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 SIGMAR1Q99720 223 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 SLC25A21Q9BQT8 299 aaPredicted RBP0.08□□□□□ -2.4
SYCP3-205ENST00000478238 GGACTQ9BVM4 153 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 KRTAP2-4Q9BYR9 128 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 KRTAP2-1Q9BYU5 128 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 WFDC10AQ9H1F0 79 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 RNF122Q9H9V4 155 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 PLAC8Q9NZF1 115 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 ZDBF2Q9HCK1 2354 aa0.08□□□□□ -2.4
SYCP3-205ENST00000478238 MYH3P11055 1940 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 FREM3P0C091 2139 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 NCOA1Q15788 1441 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 MUC4Q99102 2169 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 TRGV10A0A0A0MS01 117 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 TRAV4A0A0B4J268 109 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 NUPR2A6NF83 97 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 A8MWV9 139 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 H3BRM9 83 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 J3QRK9 145 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 TAX1BP3O14907 124 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 ERC2-IT1O76042 136 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 HAND1O96004 215 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 CDKN2CP42773 168 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 ATP5G3P48201 142 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 RRN3P1Q2M238 152 aa0.07□□□□□ -2.4
SYCP3-205ENST00000478238 SPINK9Q5DT21 86 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms