RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ALMS1Q8TCU4 4167 aa15.83■□□□□ 0.12
COL9A3-211ENST00000477612 ZNF705EA8MWA4 302 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-211ENST00000477612 H3BMM0 161 aa15.83■□□□□ 0.12
COL9A3-211ENST00000477612 C4BPBP20851 252 aa15.83■□□□□ 0.12
COL9A3-211ENST00000477612 AKR1C1Q04828 323 aa15.83■□□□□ 0.12
COL9A3-211ENST00000477612 ZNF431Q8TF32 576 aaPredicted RBP15.83■□□□□ 0.12
COL9A3-211ENST00000477612 WDR12Q9GZL7 423 aaKnown RBP15.83■□□□□ 0.12
COL9A3-211ENST00000477612 NUDT15Q9NV35 164 aa15.83■□□□□ 0.12
COL9A3-211ENST00000477612 RCL1Q9Y2P8 373 aaKnown RBP15.83■□□□□ 0.12
COL9A3-211ENST00000477612 TRAV6A0A075B6T7 132 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 CXorf65A6NEN9 183 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 GATA2P23769 480 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-211ENST00000477612 DLK1P80370 383 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 CEMP1Q6PRD7 247 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-211ENST00000477612 OR8I2Q8N0Y5 310 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 NPVFQ9HCQ7 196 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 GSKIPQ9P0R6 139 aa15.82■□□□□ 0.12
COL9A3-211ENST00000477612 ZNF98A6NK75 572 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 CCNKO75909 580 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 MBPP02686 304 aaPredicted RBP15.81■□□□□ 0.12
COL9A3-211ENST00000477612 HLA-DRB4P13762 266 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 ID1P41134 155 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 PSMB3P49720 205 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 PLP1P60201 277 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 PMS2P11Q13670 270 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 CYP2G1PQ6ZSU1 146 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 Q8NAQ8 132 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 PPP1R14BQ96C90 147 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 CLUHP3Q96NS8 147 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 TBC1D24Q9ULP9 559 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 HLA-DRB4X5D2U9 266 aa15.81■□□□□ 0.12
COL9A3-211ENST00000477612 C7orf66A4D0T2 115 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 K7EPK0 472 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 SCGB1D2O95969 90 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 H2AFB2P0C5Z0 115 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 METTL15P1P0C7V9 234 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 S100A7P31151 101 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 SAMD13Q5VXD3 122 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 OR10P1Q8NGE3 313 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 C17orf77Q96MU5 243 aa15.8■□□□□ 0.12
COL9A3-211ENST00000477612 ISLRO14498 428 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 ORM2P19652 201 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 MEOX2P50222 304 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 NUTF2P61970 127 aaKnown RBP15.79■□□□□ 0.12
COL9A3-211ENST00000477612 SELENOTP62341 195 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 ASAH1Q13510 395 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 C12orf45Q8N5I9 185 aaPredicted RBP15.79■□□□□ 0.12
COL9A3-211ENST00000477612 GPR82Q96P67 336 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 SEC22CQ9BRL7 303 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 GGACTQ9BVM4 153 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 C1QTNF4Q9BXJ3 329 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 SLC25A32Q9H2D1 315 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 X6R8D5 127 aa15.79■□□□□ 0.12
COL9A3-211ENST00000477612 FAM240BA0A1B0GVZ2 78 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 SMCO3A2RU48 225 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 CCSO14618 274 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 IL5P05113 134 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 MIFP14174 115 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 ZNF846Q147U1 533 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 MZT2BQ6NZ67 158 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 FOXI2Q6ZQN5 318 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 C11orf45Q8TAV5 145 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 PHLDA1Q8WV24 401 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-211ENST00000477612 TMEM147Q9BVK8 224 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 MFFQ9GZY8 342 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 SAV1Q9H4B6 383 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-211ENST00000477612 C11orf1Q9H5F2 150 aa15.78■□□□□ 0.12
COL9A3-211ENST00000477612 GALR1P47211 349 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 ARL16Q0P5N6 197 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 GDF5OSQ5U4N7 250 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 SPATA31B1PQ5VZV4 182 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 OR1B1Q8NGR6 318 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 C2orf50Q96LR7 162 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 HRH4Q9H3N8 390 aa15.77■□□□□ 0.12
COL9A3-211ENST00000477612 KLK5Q9Y337 293 aaPredicted RBP15.77■□□□□ 0.12
COL9A3-211ENST00000477612 H3BRN7 92 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 DEDDO75618 318 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 RBMY1A1P0DJD3 496 aaKnown RBP15.76■□□□□ 0.11
COL9A3-211ENST00000477612 RBMY1CP0DJD4 496 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 RRAS2P62070 204 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-211ENST00000477612 IL15RAQ13261 267 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 RBMY1FQ15415 496 aaKnown RBP15.76■□□□□ 0.11
COL9A3-211ENST00000477612 TEPPQ6URK8 271 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 LINC00052Q96N35 136 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 SLC25A39Q9BZJ4 359 aaPredicted RBP15.76■□□□□ 0.11
COL9A3-211ENST00000477612 SLC25A22Q9H936 323 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 MGAT4CQ9UBM8 478 aa15.76■□□□□ 0.11
COL9A3-211ENST00000477612 LINC00476Q8WZB0 136 aa15.75■□□□□ 0.11
COL9A3-211ENST00000477612 SHANK2-AS3Q9BTD1 123 aa15.75■□□□□ 0.11
COL9A3-211ENST00000477612 RSG1Q9BU20 258 aa15.75■□□□□ 0.11
COL9A3-211ENST00000477612 CLEC5AQ9NY25 188 aa15.75■□□□□ 0.11
COL9A3-211ENST00000477612 PTTG2Q9NZH5 202 aa15.75■□□□□ 0.11
COL9A3-211ENST00000477612 IGHV4-28A0A0C4DH34 117 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 C5orf51A6NDU8 294 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 DEFB4AO15263 64 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 HYPMO75409 117 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 UPK1BO75841 260 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 LINC00869P0C866 280 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 DEFB1P60022 68 aa15.74■□□□□ 0.11
COL9A3-211ENST00000477612 NANOS2P60321 138 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms