RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CT45A1Q5HYN5 189 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 CT45A3Q8NHU0 189 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 CGB3P0DN86 165 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 CGB7P0DN87 165 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 MYOD1P15172 320 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 CFHR2P36980 270 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 LGALS9BQ3B8N2 356 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 PSMG4Q5JS54 123 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 ASPHD1Q5U4P2 390 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 LGALS9CQ6DKI2 356 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 FA2HQ7L5A8 372 aa12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 ZNF71Q9NQZ8 489 aaPredicted RBP12.29□□□□□ -0.44
CLSTN1-205ENST00000477264 A1L4Q6 167 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 SMAD7O15105 426 aaKnown RBP12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 FSTL3O95633 263 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 MOSP00540 346 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 LGALS7P47929 136 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 GNG5P63218 68 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 C1orf185Q5T7R7 199 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 C1orf229Q6ZS94 237 aaPredicted RBP12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 OR5AN1Q8NGI8 311 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 PLP1P60201 277 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 RPRMLQ8N4K4 120 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 DOCK7Q96N67 2140 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 SPCS1Q9Y6A9 102 aa12.28□□□□□ -0.44
CLSTN1-205ENST00000477264 BOD1L1Q8NFC6 3051 aa12.27□□□□□ -0.44
CLSTN1-205ENST00000477264 H0Y8G0 127 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 UQCRFS1P47985 274 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 RIGQ13278 110 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 C16orf54Q6UWD8 224 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 SLC25A48Q6ZT89 311 aaKnown RBP12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 ITLN1Q8WWA0 313 aa12.27□□□□□ -0.45
CLSTN1-205ENST00000477264 KBTBD11-OT1A0A1B0GTJ5 212 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 FABP2P12104 132 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 ZNF137PP52743 207 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 C17orf58Q2M2W7 97 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 MBNL2Q5VZF2 373 aaKnown RBP12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 SMPXQ9UHP9 88 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 A0A1B0GV72 72 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 PGPA6NDG6 321 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 IGHV1-2P23083 117 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 OSR1Q8TAX0 266 aaPredicted RBP12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 NDUFA4L2Q9NRX3 87 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 PTPRQQ9UMZ3 2332 aa12.26□□□□□ -0.45
CLSTN1-205ENST00000477264 TMEM189A5PLL7 270 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 IGKV3-15P01624 115 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 HOXC12P31275 282 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 Q6AWC8 147 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 LINC00305Q7Z4B0 112 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 SVILO95425 2214 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 A0A1B0GUT8 65 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 TMEM238LA0A1B0GVL6 79 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 C22orf46C9J442 243 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 SAA1P0DJI8 122 aaPredicted RBP12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 TIMM23BQ5SRD1 257 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 PRSS57Q6UWY2 283 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 ADAMTSL5Q6ZMM2 481 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 LINC00322Q6ZN03 302 aaPredicted RBP12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 Q86TA4 180 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 CNEP1R1Q8N9A8 125 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 SPENQ96T58 3664 aaKnown RBP12.25□□□□□ -0.45
CLSTN1-205ENST00000477264 IGF2RP11717 2491 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 IGHV3-13P01766 116 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 IGHV3-7P01780 117 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 TCRAP04437 139 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 CT45A10P0DMU9 189 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 CD24P25063 80 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 COL8A1P27658 744 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 MLANAQ16655 118 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 C1orf162Q8NEQ5 155 aaPredicted RBP12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 ATMQ13315 3056 aa12.24□□□□□ -0.45
CLSTN1-205ENST00000477264 PPIAL4GP0DN37 164 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 WFDC8Q8IUA0 241 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 C9orf106Q8NAJ2 232 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 PRSS3P2Q8NHM4 247 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 MCRIP2Q9BUT9 160 aaKnown RBP12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 PLSCR4Q9NRQ2 329 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 CACNA1GO43497 2377 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 IGKV1D-37A0A075B6S9 117 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 LINC00574Q9H8X3 128 aa12.23□□□□□ -0.45
CLSTN1-205ENST00000477264 J3QR89 54 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 CSN3P07498 182 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 ZNF138P52744 262 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 ZCCHC24Q8N2G6 241 aaKnown RBP12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 Q8NA96 180 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 OR10X1Q8NGY0 326 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 PIFOQ8TCI5 191 aa12.22□□□□□ -0.45
CLSTN1-205ENST00000477264 LEAP2Q969E1 77 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms