RNA–Protein interactions for RNA: ENST00000477086.5

MUC4-216, Transcript of mucin 4, cell surface associated, human

TSL 5

Gene MUC4, Length 16,353 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-216	ENST00000477086	RFLNB	Q8N5W9	214 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	PSG4	Q00888	419 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	SFTA2	Q6UW10	78 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	SHISA5	Q8N114	240 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	RASL10B	Q96S79	203 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	CRIM1	Q9NZV1	1036 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	TRAV13-2	A0A0B4J235	113 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	CRYBA4	P53673	196 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	PLAUR	Q03405	335 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	EGR4	Q05215	589 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	LOXL2	Q9Y4K0	774 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	PATE4	P0C8F1	98 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	PDLIM4	P50479	330 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	PDE6H	Q13956	83 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	CGB1	A6NKQ9	187 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086	ZNF721	Q8TF20	911 aa		4.65	□□□□□ -1.67
MUC4-216	ENST00000477086		A0A1W2PPI3	338 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	RNASE4	P34096	147 aa	Known RBP	4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	RPL32	P62910	135 aa	Known RBP	4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	TMEM42	Q69YG0	159 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	DMRTC2	Q8IXT2	367 aa	Predicted RBP	4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	JMJD8	Q96S16	334 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	TRGV9	Q99603	122 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	BHLHA9	Q7RTU4	235 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	C8orf46	Q8TAG6	207 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086		A0A1W2PPE3	182 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	CCL2	P13500	99 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	C20orf173	Q96LM9	149 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	IGHV3OR15-7	A0A075B7D8	119 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	UPK2	O00526	184 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	CCL1	P22362	96 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	GNG5	P63218	68 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	ATP6V0E2	Q8NHE4	81 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	TMEM141	Q96I45	108 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	PSG8	Q9UQ74	426 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	WDR90	Q96KV7	1748 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	CD28	P10747	220 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	TMEM229A	B2RXF0	380 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	PRO1854	Q9UHT4	67 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	PIEZO1	Q92508	2521 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	HOXD3	P31249	432 aa	Predicted RBP	4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	APOBEC3A	P31941	199 aa	Predicted RBP	4.64	□□□□□ -1.67
MUC4-216	ENST00000477086	OR13A1	Q8NGR1	328 aa		4.64	□□□□□ -1.67
MUC4-216	ENST00000477086		D6R8Y8	96 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	SIT1	Q9Y3P8	196 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	TRGV11	A0A075B6L2	103 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	NMS	Q5H8A3	153 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	ZC2HC1B	Q5TFG8	222 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	COL9A1	P20849	921 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	ATG2A	Q2TAZ0	1938 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	ZIC3	O60481	467 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C1orf122	Q6ZSJ8	110 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	CTHRC1	Q96CG8	243 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	APELA	P0DMC3	54 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	LINC00158	P58513	81 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C1QC	P02747	245 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	CELA3A	P09093	270 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	COA6	Q5JTJ3	125 aa	Known RBP	4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	NAA38	Q9BRA0	125 aa	Known RBP	4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	TMEM243	Q9BU79	118 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	WDR83OS	Q9Y284	106 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	PRADC1	Q9BSG0	188 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C1QTNF5	Q9BXJ0	243 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C15orf61	A6NNL5	157 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086		J3QRE1	110 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	YPEL1	O60688	119 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	YPEL2	Q96QA6	119 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	R3HDML	Q9H3Y0	253 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C15orf53	Q8NAA6	179 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086		Q6ZWC4	215 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	SPEM2	Q0P670	501 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	C9orf40	Q8IXQ3	194 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	GLMP	Q8WWB7	406 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	FOXA2	Q9Y261	457 aa	Predicted RBP	4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	SMIM27	A0A1W2PRY6	76 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086		H0Y8X5	98 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	SP7	Q8TDD2	431 aa	Predicted RBP	4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	PATE1	Q8WXA2	126 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	TMEM54	Q969K7	222 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	TCRBV4S1A1T	A0A5B7	111 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	CDKN1A	P38936	164 aa		4.63	□□□□□ -1.67
MUC4-216	ENST00000477086	COL16A1	Q07092	1604 aa	Predicted RBP	4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	C18orf32	Q8TCD1	76 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	TRAV13-1	A0A0B4J241	112 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	PFN1	P07737	140 aa	Known RBP	4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	SAA1	P0DJI8	122 aa	Predicted RBP	4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	RASL10A	Q92737	203 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	IGHV3-21	A0A0B4J1V1	117 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	JPT2	Q9H910	190 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086		H3BMG7	143 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	LGALS9B	Q3B8N2	356 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	LGALS9C	Q6DKI2	356 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	LYPD1	Q8N2G4	141 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	C21orf62	Q9NYP8	219 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	TRAV8-3	A0A0A6YYJ7	113 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	C21orf140	B9A014	251 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	CCL25	O15444	150 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	AHRR	A9YTQ3	701 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	IGKV1D-16	P01601	117 aa		4.62	□□□□□ -1.67
MUC4-216	ENST00000477086	ATP5E	P56381	51 aa	Predicted RBP	4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms