RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PSG1P11464 419 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 LINC00310P59036 64 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 MMDQ15546 238 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 C19orf35Q6ZS72 473 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 RASL11BQ9BPW5 248 aa13.06□□□□□ -0.32
TMEM53-208ENST00000476724 SSBP3Q9BWW4 388 aaPredicted RBP13.06□□□□□ -0.32
TMEM53-208ENST00000476724 LOC105371242A0A075B767 164 aa13.05□□□□□ -0.32
TMEM53-208ENST00000476724 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
TMEM53-208ENST00000476724 PRTN3P24158 256 aa13.05□□□□□ -0.32
TMEM53-208ENST00000476724 ARF6P62330 175 aa13.05□□□□□ -0.32
TMEM53-208ENST00000476724 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
TMEM53-208ENST00000476724 NDUFA3O95167 84 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 TOMM40O96008 361 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 BRS3P32247 399 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 GNG5P63218 68 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 MRPL54Q6P161 138 aaKnown RBP13.04□□□□□ -0.32
TMEM53-208ENST00000476724 C1orf122Q6ZSJ8 110 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 CFHR4Q92496 578 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 FAM168AQ92567 244 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 GNB4Q9HAV0 340 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 SLC35B1P78383 322 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
TMEM53-208ENST00000476724 LDLRAD2Q5SZI1 272 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 TMEM68Q96MH6 324 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 Q9H3A6 140 aa13.04□□□□□ -0.32
TMEM53-208ENST00000476724 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
TMEM53-208ENST00000476724 ODF3BA8MYP8 253 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 APCSP02743 223 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 GPR6P46095 362 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 LYZP61626 148 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 SRSF1Q07955 248 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 NDUFAF3Q9BU61 184 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 SAMD10Q9BYL1 202 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 SLC25A39Q9BZJ4 359 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 CA1P00915 261 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 TCRAP04437 139 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 C1orf194Q5T5A4 169 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
TMEM53-208ENST00000476724 GSX1Q9H4S2 264 aaPredicted RBP13.03□□□□□ -0.32
TMEM53-208ENST00000476724 MYO18BQ8IUG5 2567 aa13.02□□□□□ -0.32
TMEM53-208ENST00000476724 BMPR1BO00238 502 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 LTAP01374 205 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 CT83Q5H943 113 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 SIGLECL1Q8N7X8 197 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF492Q9P255 531 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
TMEM53-208ENST00000476724 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 K7EIM0 57 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF253O75346 499 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 GPX1P07203 203 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 SNRPCP09234 159 aaKnown RBP13.01□□□□□ -0.33
TMEM53-208ENST00000476724 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 CCDC144NLQ6NUI1 221 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 Q6ZWC4 215 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 KIR3DL3Q8N743 410 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 HSPB9Q9BQS6 159 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF705FA8MVS1 300 aaPredicted RBP13.01□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF705DP0CH99 300 aaPredicted RBP13.01□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF705BP0CI00 300 aaPredicted RBP13.01□□□□□ -0.33
TMEM53-208ENST00000476724 EFNA4P52798 201 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 PRSS22Q9GZN4 317 aa13.01□□□□□ -0.33
TMEM53-208ENST00000476724 A8MWL6 223 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 OVOL3O00110 214 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 SRIP30626 198 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 LEMD1Q68G75 181 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 KCNS1Q96KK3 526 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 TBX15Q96SF7 602 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 POLR3KQ9Y2Y1 108 aaPredicted RBP13□□□□□ -0.33
TMEM53-208ENST00000476724 VPS13CQ709C8 3753 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 F2Z2F3 143 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 C5orf64Q2M2E5 130 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 LHFPL4Q7Z7J7 247 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 BPIFA4PQ86YQ2 179 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 NEU1Q99519 415 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
TMEM53-208ENST00000476724 ZNF586Q9NXT0 402 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
TMEM53-208ENST00000476724 SOX21Q9Y651 276 aaPredicted RBP13□□□□□ -0.33
TMEM53-208ENST00000476724 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 TRBV6-1A0A0K0K1D8 114 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
TMEM53-208ENST00000476724 UTP20O75691 2785 aaKnown RBP12.99□□□□□ -0.33
TMEM53-208ENST00000476724 C19orf71A6NCJ1 209 aa12.98□□□□□ -0.33
TMEM53-208ENST00000476724 NPIPB5A8MRT5 1133 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms