RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 VPS25Q9BRG1 176 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 FXYD6Q9H0Q3 95 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 NMNAT1Q9HAN9 279 aaPredicted RBP2.75□□□□□ -1.97
SDHB-205ENST00000475506 MRPL16Q9NX20 251 aaKnown RBP2.75□□□□□ -1.97
SDHB-205ENST00000475506 RASL12Q9NYN1 266 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 COMMD3Q9UBI1 195 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 VPS29Q9UBQ0 182 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 SLC35A3Q9Y2D2 325 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 KLK5Q9Y337 293 aaPredicted RBP2.75□□□□□ -1.97
SDHB-205ENST00000475506 UBR1Q8IWV7 1749 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 PIK3C2BO00750 1634 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 SLX4Q8IY92 1834 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 DOCK6Q96HP0 2047 aa2.75□□□□□ -1.97
SDHB-205ENST00000475506 DUOX1Q9NRD9 1551 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 SCN11AQ9UI33 1791 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 ZFC3H1O60293 1989 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 C5P01031 1676 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 TOPAZ1Q8N9V7 1692 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 COL1A1P02452 1464 aaPredicted RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 A0A096LPI6 279 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 SMIM9A6NGZ8 99 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 C9JCJ5 164 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 LST1O00453 97 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 UBFD1O14562 309 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 ARPC5O15511 151 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 IL5P05113 134 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 C8GP07360 202 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 UCHL1P09936 223 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 HSD11B1P28845 292 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 FAUP35544 74 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 LPAR6P43657 344 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 ZNF140P52738 457 aaPredicted RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 NDUFA6P56556 154 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 RPL19P84098 196 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 PSG4Q00888 419 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 SRSF6Q13247 344 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 SURF2Q15527 256 aaPredicted RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 COL5A1-AS1Q5SY13 56 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 LRRC25Q8N386 305 aaPredicted RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 LRRC18Q8N456 261 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 GNPDA2Q8TDQ7 276 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 KLK6Q92876 244 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 NMNAT3Q96T66 252 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 PBDC1Q9BVG4 233 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 DDA1Q9BW61 102 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 PCBD2Q9H0N5 130 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 PRO1933Q9H354 126 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 UQCC1Q9NVA1 299 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 TXNL4BQ9NX01 149 aaKnown RBP2.74□□□□□ -1.97
SDHB-205ENST00000475506 NDUFB11Q9NX14 153 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 GSKIPQ9P0R6 139 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 PKIGQ9Y2B9 76 aa2.74□□□□□ -1.97
SDHB-205ENST00000475506 A0A1B0GV72 72 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 TRDV1A0A1B0GX56 115 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 GGT3PA6NGU5 568 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 A8MUN3 132 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 TMEM238C9JI98 176 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 K7EP13 123 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 FXYD1O00168 92 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 PLXNB1O43157 2135 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZNF682O95780 498 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 IFNA21P01568 189 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 PPBPP02775 128 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 FGF6P10767 208 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 TPT1P13693 172 aaKnown RBP2.73□□□□□ -1.97
SDHB-205ENST00000475506 CD200P41217 278 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 OR4D2P58180 307 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 RPS20P60866 119 aaKnown RBP2.73□□□□□ -1.97
SDHB-205ENST00000475506 TBPL1P62380 186 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 CDK6Q00534 326 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 FOXF1Q12946 379 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZNF345Q14585 488 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 DEFB115Q30KQ5 88 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 PYY3Q5JQD4 70 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 NCMAPQ5T1S8 102 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
SDHB-205ENST00000475506 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 CNEP1R1Q8N9A8 125 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 CMTM2Q8TAZ6 248 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 GPR119Q8TDV5 335 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZNF471Q9BX82 626 aaPredicted RBP2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZFP30Q9Y2G7 519 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 ZNF337Q9Y3M9 751 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 MINOS1-NBL1R4GNA1 71 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 PKD1L3Q7Z443 1732 aa2.73□□□□□ -1.97
SDHB-205ENST00000475506 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
SDHB-205ENST00000475506 AKAP11Q9UKA4 1901 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 A0A087WUU8 490 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 IGHV1-69-2A0A0G2JMI3 117 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 TMEM269A0A1B0GVZ9 245 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 C17orf51A8MQB3 221 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 K7ERU9 68 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 UBL3O95164 117 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 CST2P09228 141 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 SCGB1A1P11684 91 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 PPIBP23284 216 aaKnown RBP2.72□□□□□ -1.97
SDHB-205ENST00000475506 H3F3AP84243 136 aa2.72□□□□□ -1.97
SDHB-205ENST00000475506 TAF9Q16594 264 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms