RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ZNF860A6NHJ4 632 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 A8MUN3 132 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF727A8MUV8 499 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF705FA8MVS1 300 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GGTLC3B5MD39 225 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM262E9PQX1 116 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 H3BRM9 83 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C15orf65H3BRN8 121 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 H7C2G1 150 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C19orf84I3L1E1 186 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 J3QLW9 94 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 J3QQQ9 107 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 APOC4-APOC2K7ER74 178 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GEMIN2O14893 280 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 UQCRQO14949 82 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF73O43830 326 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GNG7O60262 68 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 EDF1O60869 148 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HYPMO75409 117 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LY6HO94772 140 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BRI3O95415 125 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 EPPINO95925 133 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DNAL4O96015 105 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGHG2P01859 326 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HBDP02042 147 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 APOC2P02655 101 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C1QCP02747 245 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TRGV3P03979 118 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SHBGP04278 402 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IL5P05113 134 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SLC25A5P05141 298 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SCTP09683 121 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CISD3P0C7P0 127 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ASAH2BP0C7U1 165 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BAALC-AS2P0C853 105 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SAA1P0DJI8 122 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 INAFM2P0DMQ5 153 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PYYP10082 97 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GZMBP10144 247 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MGST1P10620 155 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 COX6A1P12074 109 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IL9P15248 144 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MUC1P15941 1255 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CCL1P22362 96 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CRYGSP22914 178 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPS3P23396 243 aaKnown RBP eCLIP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PEBP1P30086 187 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 BRS3P32247 399 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPL22P35268 128 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FUSP35637 526 aaKnown RBP eCLIP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 XCL1P47992 114 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 POLR2HP52434 150 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FXYD2P54710 66 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ARPP19P56211 112 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ATP5EP56381 51 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TSPEAR-AS2P59090 65 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DNAJB13P59910 316 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 S100A10P60903 97 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 KRTDAPP60985 99 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MAXP61244 160 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPL26P61254 145 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FGF12P61328 243 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PKIAP61925 76 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPS11P62280 158 aaKnown RBP eCLIP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RPS25P62851 125 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 UBE2L3P68036 154 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CDK6Q00534 326 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PSG9Q00887 426 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 RUNX1Q01196 453 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 PLGLB1Q02325 96 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF90Q03938 601 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SYCNQ0VAF6 134 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF846Q147U1 533 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ELOBQ15370 118 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 OR8G1Q15617 311 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DEFB115Q30KQ5 88 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 KRTAP6-3Q3LI67 103 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MRPL51Q4U2R6 128 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MORN2Q502X0 79 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MEIG1Q5JSS6 88 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 CLLU1Q5K131 121 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FAM74A1Q5RGS3 127 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DNLZQ5SXM8 178 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 COL5A1-AS1Q5SY13 56 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 GLYATL3Q5SZD4 288 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LDLRAD2Q5SZI1 272 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C9orf153Q5TBE3 101 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 TMEM244Q5VVB8 128 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 Q5W150 140 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 FAM104BQ5XKR9 115 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 C12orf73Q69YU5 71 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 MRPL54Q6P161 138 aaKnown RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 ZNF880Q6PDB4 577 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 HAGHLQ6PII5 290 aaPredicted RBP0.47□□□□□ -2.33
HDAC9-222ENST00000474742 IGFL1Q6UW32 110 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 LCN15Q6UWW0 184 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 UNQ9165/PRO28630Q6UXU0 137 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 SDIM1Q6ZPB5 146 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 DEFB128Q7Z7B8 93 aa0.47□□□□□ -2.33
HDAC9-222ENST00000474742 WDR86Q86TI4 376 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms