RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ARL6IP6Q8N6S5 226 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 GSX1Q9H4S2 264 aaPredicted RBP17.08■□□□□ 0.32
CCM2-206ENST00000474617 C7orf69Q9H7B7 122 aa17.08■□□□□ 0.32
CCM2-206ENST00000474617 BEX4Q9NWD9 120 aaPredicted RBP17.08■□□□□ 0.32
CCM2-206ENST00000474617 SPTAN1Q13813 2472 aaKnown RBP17.08■□□□□ 0.32
CCM2-206ENST00000474617 PGPEP1LA6NFU8 196 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 PHOX2AO14813 284 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BKO60814 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BJP06899 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BOP23527 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BBP33778 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BDP58876 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 UBE2G1P62253 170 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BCP62807 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 RANP62826 216 aaKnown RBP17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST2H2BEQ16778 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 RPEL1Q2QD12 228 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 KLF17Q5JT82 389 aaPredicted RBP17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BHQ93079 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BNQ99877 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HIST1H2BMQ99879 126 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 HSPB9Q9BQS6 159 aa17.07■□□□□ 0.32
CCM2-206ENST00000474617 TRBV6-1A0A0K0K1D8 114 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 PGPA6NDG6 321 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 ATP6V0E1O15342 81 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 HOXA5P20719 270 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 LRRC75A-AS1Q8N1F1 130 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 LINC01356Q8N9X3 169 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 TRBV7-1A0A0A6YYK4 115 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 F8W735 103 aaPredicted RBP17.06■□□□□ 0.32
CCM2-206ENST00000474617 OR2J3O76001 311 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 AKR1D1P51857 326 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 FLNCQ14315 2725 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 Q9H3A6 140 aa17.06■□□□□ 0.32
CCM2-206ENST00000474617 AURKAIP1Q9NWT8 199 aaPredicted RBP17.06■□□□□ 0.32
CCM2-206ENST00000474617 H3BUA1 57 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 IGLV2-8P01709 118 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 ACTL10Q5JWF8 245 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 BAGE2Q86Y30 109 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 LINC00518Q8N0U6 118 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 CMTM2Q8TAZ6 248 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 ZNF502Q8TBZ5 544 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 BLNKQ8WV28 456 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 EEF1AKMT3Q96AZ1 226 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 GPR82Q96P67 336 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 V9GYV3 84 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 AKAP6Q13023 2319 aa17.05■□□□□ 0.32
CCM2-206ENST00000474617 TACC2O95359 2948 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 TRBV19A0A075B6N1 114 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 SERTM2A0A1B0GWG4 89 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 FAM223BA6NKX1 122 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 BMPR1BO00238 502 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 TRGC1P0CF51 173 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 IGLC2P0DOY2 106 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 RPL7P18124 248 aaKnown RBP17.04■□□□□ 0.32
CCM2-206ENST00000474617 CDX1P47902 265 aaPredicted RBP17.04■□□□□ 0.32
CCM2-206ENST00000474617 IBA57Q5T440 356 aaKnown RBP17.04■□□□□ 0.32
CCM2-206ENST00000474617 FAM223AQ8IWN6 122 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 HIF1ANQ9NWT6 349 aa17.04■□□□□ 0.32
CCM2-206ENST00000474617 A0A0U1RQK1 487 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 ZNF320A2RRD8 509 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 ZNF98A6NK75 572 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 K7EQM0 130 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 TCRAP04437 139 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 CTSGP08311 255 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 ECSCRQ19T08 205 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 PIFOQ8TCI5 191 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 FRZBQ92765 325 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 ZNF580Q9UK33 172 aa17.03■□□□□ 0.32
CCM2-206ENST00000474617 UBR5O95071 2799 aaPredicted RBP17.03■□□□□ 0.32
CCM2-206ENST00000474617 FBLL1A6NHQ2 334 aaKnown RBP17.02■□□□□ 0.32
CCM2-206ENST00000474617 IGF1P05019 195 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 SMIM6P0DI80 62 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 RHOGP84095 191 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 LOXL1Q08397 574 aaPredicted RBP17.02■□□□□ 0.32
CCM2-206ENST00000474617 C15orf32Q32M92 178 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 ZNF586Q9NXT0 402 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 RABAC1Q9UI14 185 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 ZNF462Q96JM2 2506 aa17.02■□□□□ 0.32
CCM2-206ENST00000474617 ZNF253O75346 499 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 HNF1AP20823 631 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 NDUFA6P56556 154 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 SRSF1Q07955 248 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCM2-206ENST00000474617 COA6Q5JTJ3 125 aaKnown RBP17.01■□□□□ 0.31
CCM2-206ENST00000474617 TRAV41A0A0B4J266 112 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 A6NDX4 124 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 MT-ND6P03923 174 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 MGST1P10620 155 aaKnown RBP17.01■□□□□ 0.31
CCM2-206ENST00000474617 PSG9Q00887 426 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 C19orf54Q5BKX5 351 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 WDR73Q6P4I2 378 aa17.01■□□□□ 0.31
CCM2-206ENST00000474617 ABCA2Q9BZC7 2435 aa17■□□□□ 0.31
CCM2-206ENST00000474617 MRPS12O15235 138 aaKnown RBP17■□□□□ 0.31
CCM2-206ENST00000474617 IGHV4-38-2P0DP08 117 aa17■□□□□ 0.31
CCM2-206ENST00000474617 RELQ04864 619 aaPredicted RBP17■□□□□ 0.31
CCM2-206ENST00000474617 USF2Q15853 346 aaPredicted RBP17■□□□□ 0.31
CCM2-206ENST00000474617 LEMD1Q68G75 181 aa17■□□□□ 0.31
CCM2-206ENST00000474617 RASL11AQ6T310 242 aa17■□□□□ 0.31
CCM2-206ENST00000474617 ZNF492Q9P255 531 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms