RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 RNF24Q9Y225 148 aa7.69□□□□□ -1.18
USP39-214ENST00000474572 TRBV19A0A075B6N1 114 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 IGHV4-30-2A0A087WSY4 118 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 TRBV9A0A0B4J1U6 114 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 TCRAP04437 139 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 SLC25A5P05141 298 aaKnown RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 RANP62826 216 aaKnown RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 GNG5P63218 68 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 USF2Q15853 346 aaPredicted RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 COX19Q49B96 90 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 C19orf54Q5BKX5 351 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 IBA57Q5T440 356 aaKnown RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 LEMD1Q68G75 181 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 S100A7AQ86SG5 101 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 PIFOQ8TCI5 191 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 FMC1Q96HJ9 113 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 BBC3Q96PG8 261 aaPredicted RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 CHRDL1Q9BU40 450 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 RNASE7Q9H1E1 156 aaKnown RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 GAR1Q9NY12 217 aaKnown RBP7.68□□□□□ -1.18
USP39-214ENST00000474572 ABCA2Q9BZC7 2435 aa7.68□□□□□ -1.18
USP39-214ENST00000474572 CHD8Q9HCK8 2581 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 RELNP78509 3460 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 PIEZO1Q92508 2521 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ATP6V0E1O15342 81 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 OR2J3O76001 311 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 LTAP01374 205 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 IL4P05112 153 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ATP5J2P56134 94 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 DSCR9P59020 149 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 PDE6HQ13956 83 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 DNLZQ5SXM8 178 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 GFI1BQ5VTD9 330 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 SIGLEC15Q6ZMC9 328 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ARL6IP6Q8N6S5 226 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ZNF502Q8TBZ5 544 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 BLNKQ8WV28 456 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 GPR82Q96P67 336 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ATP6V0BQ99437 205 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 GPR61Q9BZJ8 451 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 ZNF492Q9P255 531 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 MOB4Q9Y3A3 225 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 TRAPPC1Q9Y5R8 145 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
USP39-214ENST00000474572 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 TRAV40A0A0B4J280 105 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 C19orf71A6NCJ1 209 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 MT-ND6P03923 174 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 CTSGP08311 255 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 MGST1P10620 155 aaKnown RBP7.66□□□□□ -1.18
USP39-214ENST00000474572 S100A2P29034 98 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 UBE2G1P62253 170 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 S100A12P80511 92 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 SRSF1Q07955 248 aaKnown RBP eCLIP7.66□□□□□ -1.183e-6■■■■■ 29.6
USP39-214ENST00000474572 Q56UQ5 140 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 OR8I2Q8N0Y5 310 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 OR4F17Q8NGA8 305 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 GRAMD2BQ96HH9 432 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 GNB1LQ9BYB4 327 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 FBXL7Q9UJT9 491 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 LRBAP50851 2863 aa7.66□□□□□ -1.18
USP39-214ENST00000474572 TPRP12270 2363 aaKnown RBP7.66□□□□□ -1.18
USP39-214ENST00000474572 A0A096LNT2 108 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 IZUMO1RA6ND01 250 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 GATCO43716 136 aaKnown RBP7.65□□□□□ -1.18
USP39-214ENST00000474572 BRI3O95415 125 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 AMY1AP04745 511 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 MSMBP08118 114 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 SLC25A16P16260 332 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 ADMP35318 185 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 RPL19P84098 196 aaKnown RBP7.65□□□□□ -1.18
USP39-214ENST00000474572 CT83Q5H943 113 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 PYY3Q5JQD4 70 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 WDR73Q6P4I2 378 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 C16orf54Q6UWD8 224 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 UNQ5815/PRO19632Q6UWF5 114 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 Q86TA4 180 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 ZNF843Q8N446 348 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 WIPF2Q8TF74 440 aaPredicted RBP7.65□□□□□ -1.18
USP39-214ENST00000474572 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 HIST1H2BLQ99880 126 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 PRSS22Q9GZN4 317 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 ZFAND3Q9H8U3 227 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 S4R3C0 116 aa7.65□□□□□ -1.18
USP39-214ENST00000474572 SPTBN1Q01082 2364 aaKnown RBP7.64□□□□□ -1.19
USP39-214ENST00000474572 ZNF705GA8MUZ8 300 aaPredicted RBP7.64□□□□□ -1.19
USP39-214ENST00000474572 ZNF253O75346 499 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 PRB1P04280 392 aa7.64□□□□□ -1.19
USP39-214ENST00000474572 SNRPCP09234 159 aaKnown RBP7.64□□□□□ -1.19
USP39-214ENST00000474572 CBLN1P23435 193 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms