RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 COL8A2P25067 703 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 ERVK-16P61578 105 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 PIK3CD-AS1Q5SR53 167 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 MYOZ3Q8TDC0 251 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 PGLYRP4Q96LB8 373 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 FAM103A1Q9BTL3 118 aaKnown RBP2.71□□□□□ -1.98
UBR3-208ENST00000474426 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 TRAPPC1Q9Y5R8 145 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 SAMD9LQ8IVG5 1584 aa2.71□□□□□ -1.98
UBR3-208ENST00000474426 NYNRINQ9P2P1 1898 aaKnown RBP2.7□□□□□ -1.98
UBR3-208ENST00000474426 KLLNB2CW77 178 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 F5H697 171 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 GPR137BO60478 399 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 ATP1B1P05026 303 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 LMO2P25791 158 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 DSCR4P56555 118 aaPredicted RBP2.7□□□□□ -1.98
UBR3-208ENST00000474426 TMEM187Q14656 261 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 ICAM4Q14773 271 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 CST6Q15828 149 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 CEMP1Q6PRD7 247 aaPredicted RBP2.7□□□□□ -1.98
UBR3-208ENST00000474426 PCSK4Q6UW60 755 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 CEND1Q8N111 149 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 Q8N2B8 174 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 OR2A1Q8NGT9 310 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 PAXXQ9BUH6 204 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 GABARAPL3Q9BY60 117 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 SERP1Q9Y6X1 66 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 A0A1W2PS18 150 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 A6NIN4 97 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 A8MUN3 132 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 OR1I1O60431 355 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 MPV17P39210 176 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 DAD1P61803 113 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 CDK5R1Q15078 307 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 SBSPONQ8IVN8 264 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 MKXQ8IYA7 352 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 APCDD1LQ8NCL9 501 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 ZNF721Q8TF20 911 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 IMUPQ9GZP8 106 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 FAM60AQ9NP50 221 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 HILPDAQ9Y5L2 63 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 MEGF6O75095 1541 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 TANC2Q9HCD6 1990 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 GYPBP06028 91 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 SMIM13P0DJ93 91 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 COX8AP10176 69 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 CA6P23280 308 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 NSUN5P1Q3KNT7 163 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 C1orf140Q5VVS0 124 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 RPL7L1Q6DKI1 246 aaKnown RBP2.7□□□□□ -1.98
UBR3-208ENST00000474426 OR5C1Q8NGR4 320 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 KCNS1Q96KK3 526 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 SRXN1Q9BYN0 137 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 DEFB127Q9H1M4 99 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 OCIAD1Q9NX40 245 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 MYO9BQ13459 2157 aa2.7□□□□□ -1.98
UBR3-208ENST00000474426 PLXNB3Q9ULL4 1909 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 TRGV11A0A075B6L2 103 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 IGHV1-58A0A0C4DH39 117 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 IGKCP01834 107 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 UBE2G1P62253 170 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 CFHR3Q02985 330 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 BPIFA4PQ86YQ2 179 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 DRAM1Q8N682 238 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
UBR3-208ENST00000474426 C15orf53Q8NAA6 179 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 RNF185Q96GF1 192 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 C19orf25Q9UFG5 118 aaPredicted RBP2.69□□□□□ -1.98
UBR3-208ENST00000474426 ZFHX3Q15911 3703 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 A0A096LPK6 155 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 EPOPA6NHQ4 379 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 C2orf70A6NJV1 201 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 LINC01548A6NM66 108 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 IL3RAP26951 378 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 RIGQ13278 110 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 TMEM136Q6ZRR5 245 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 VN1R4Q7Z5H5 301 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 FAM57AQ8TBR7 257 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 GPHA2Q96T91 129 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 CXCL16Q9H2A7 254 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 OBSL1O75147 1896 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 TRGV5A0A0B4J1U4 118 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 NDUFC2-KCTD14E9PQ53 114 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 H0YIZ8 118 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 GFRA3O60609 400 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 NDUFB2O95178 105 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 FSTL3O95633 263 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 ZNF823P16415 610 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 MLF2Q15773 248 aaPredicted RBP2.69□□□□□ -1.98
UBR3-208ENST00000474426 C9orf57Q5W0N0 161 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 MIC13Q5XKP0 118 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 SCGB1D4Q6XE38 83 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 ZNF491Q8N8L2 437 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 CSAG2Q9Y5P2 127 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 LY75O60449 1722 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 MRC1P22897 1456 aa2.69□□□□□ -1.98
UBR3-208ENST00000474426 LINC01553A4QN01 128 aa2.68□□□□□ -1.98
UBR3-208ENST00000474426 SLC25A14O95258 325 aaPredicted RBP2.68□□□□□ -1.98
UBR3-208ENST00000474426 HLA-DOBP13765 273 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms