RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 MYOD1P15172 320 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 OR1L4Q8NGR5 311 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
SAMM50-203ENST00000474323 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
SAMM50-203ENST00000474323 ZNF138P52744 262 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 GUSBP1Q15486 140 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 TMEM108Q6UXF1 575 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 C1orf229Q6ZS94 237 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-203ENST00000474323 BOD1L2Q8IYS8 172 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 CD177Q8N6Q3 437 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-203ENST00000474323 SCNM1Q9BWG6 230 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 AP5S1Q9NUS5 200 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 IGF2RP11717 2491 aa11.73□□□□□ -0.53
SAMM50-203ENST00000474323 C19orf71A6NCJ1 209 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 COX7A2P2O60397 106 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 CSN1S1P47710 185 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 ZNF137PP52743 207 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 MLANAQ16655 118 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 C10orf113Q5VZT2 155 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 ZADH2Q8N4Q0 377 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 TMEM189A5PLL7 270 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 HAX1O00165 279 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 MGST3O14880 152 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 PRDX2P32119 198 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-203ENST00000474323 C1orf162Q8NEQ5 155 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-203ENST00000474323 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 OR4A5Q8NH83 315 aa11.72□□□□□ -0.53
SAMM50-203ENST00000474323 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
SAMM50-203ENST00000474323 A0A1B0GV72 72 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 A1L4Q6 167 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 UPK2O00526 184 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 IGHV3-13P01766 116 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 IGHV3-7P01780 117 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 RNASE2P10153 161 aaKnown RBP11.71□□□□□ -0.53
SAMM50-203ENST00000474323 GNG5P63218 68 aa11.71□□□□□ -0.53
SAMM50-203ENST00000474323 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
SAMM50-203ENST00000474323 MOSP00540 346 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 IGHG3P01860 377 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 SLC25A5P05141 298 aaKnown RBP11.71□□□□□ -0.54
SAMM50-203ENST00000474323 AZU1P20160 251 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 MPV17P39210 176 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 FABP6P51161 128 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 SELENOKQ9Y6D0 94 aa11.71□□□□□ -0.54
SAMM50-203ENST00000474323 FABP2P12104 132 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 TMEM177Q53S58 311 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 ADAMTSL5Q6ZMM2 481 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 BHLHA15Q7RTS1 189 aaPredicted RBP11.7□□□□□ -0.54
SAMM50-203ENST00000474323 PDPNQ86YL7 162 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
SAMM50-203ENST00000474323 TEX50A0A1B0GTY4 177 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 K7EM74 188 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 LTAP01374 205 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 STXBP6Q8NFX7 210 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 NGBQ9NPG2 151 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
SAMM50-203ENST00000474323 NCR2O95944 276 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 TGFAP01135 160 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
SAMM50-203ENST00000474323 CSN3P07498 182 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 SAA2P0DJI9 122 aaPredicted RBP11.69□□□□□ -0.54
SAMM50-203ENST00000474323 PATE2Q6UY27 113 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 CITED1Q99966 193 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
SAMM50-203ENST00000474323 PGPA6NDG6 321 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 NPIPB6E9PJ23 425 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 FSTL3O95633 263 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 CLEC3BP05452 202 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 CT45A1Q5HYN5 189 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 CT45A3Q8NHU0 189 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 FAM222BQ8WU58 562 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 RAB37Q96AX2 223 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 PERPQ96FX8 193 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
SAMM50-203ENST00000474323 PPIAL4CA0A0B4J2A2 164 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 DLL1O00548 723 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
SAMM50-203ENST00000474323 LGALS9BQ3B8N2 356 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 LGALS9CQ6DKI2 356 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 FA2HQ7L5A8 372 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 PTPRQQ9UMZ3 2332 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 PPIAL4EA0A075B759 164 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 TEX48A0A1B0GUV7 120 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 PPIAL4FP0DN26 164 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 IGFL3Q6UXB1 125 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 CALYQ9NYX4 217 aa11.68□□□□□ -0.54
SAMM50-203ENST00000474323 SAMD5Q5TGI4 173 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 RPRMLQ8N4K4 120 aa11.67□□□□□ -0.54
SAMM50-203ENST00000474323 OR2Z1Q8NG97 314 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms