RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 IFT20Q8IY31 132 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 SLC30A7Q8NEW0 376 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 SLC25A21Q9BQT8 299 aaPredicted RBP2.04□□□□□ -2.08
PGK1-202ENST00000474281 YIPF3Q9GZM5 350 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 C6orf62Q9GZU0 229 aaPredicted RBP2.04□□□□□ -2.08
PGK1-202ENST00000474281 POPDC3Q9HBV1 291 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 OTORQ9NRC9 128 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 MED31Q9Y3C7 131 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 LHFPL6Q9Y693 200 aa2.04□□□□□ -2.08
PGK1-202ENST00000474281 RTTNQ86VV8 2226 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 COL11A1P12107 1806 aaPredicted RBP2.03□□□□□ -2.08
PGK1-202ENST00000474281 DISP1Q96F81 1524 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ARHGEF10O15013 1369 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 TRAV5A0A0B4J249 113 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ODAMA1E959 279 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ARL5CA6NH57 179 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ARPC5O15511 151 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 CXCL1P09341 107 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 HLA-EP13747 358 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 RPS3P23396 243 aaKnown RBP eCLIP2.03□□□□□ -2.081e-19■■■□□ 17.1
PGK1-202ENST00000474281 FKBP2P26885 142 aaKnown RBP2.03□□□□□ -2.08
PGK1-202ENST00000474281 S100A11P31949 105 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ARPP19P56211 112 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 KRTAP10-10P60014 251 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 S100A12P80511 92 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 MYL5Q02045 173 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 BRMS1LQ5PSV4 323 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 C9orf163Q8N9P6 203 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 SPACA4Q8TDM5 124 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ADAT1Q9BUB4 502 aaKnown RBP2.03□□□□□ -2.08
PGK1-202ENST00000474281 NPCDR1Q9BY65 106 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 BCL2L10Q9HD36 194 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 FN1P02751 2386 aaKnown RBP2.03□□□□□ -2.08
PGK1-202ENST00000474281 FANCMQ8IYD8 2048 aa2.03□□□□□ -2.08
PGK1-202ENST00000474281 ZFC3H1O60293 1989 aaKnown RBP2.03□□□□□ -2.08
PGK1-202ENST00000474281 CACNA1GO43497 2377 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 BCL9O00512 1426 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 TRAPPC8Q9Y2L5 1435 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 MED12LQ86YW9 2145 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 H3BRN7 92 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 GABARAPH6UMI1 98 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 IGKV4-1P06312 121 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 OR10J4P0C629 311 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 EIF3IQ13347 325 aaKnown RBP2.02□□□□□ -2.09
PGK1-202ENST00000474281 MSMO1Q15800 293 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 SPANXN5Q5MJ07 72 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 EIF5AL1Q6IS14 154 aaKnown RBP2.02□□□□□ -2.09
PGK1-202ENST00000474281 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 OR2H1Q9GZK4 316 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 TAS2R4Q9NYW5 299 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 JPT1Q9UK76 154 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 RNF11Q9Y3C5 154 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 COL4A5P29400 1685 aa2.02□□□□□ -2.09
PGK1-202ENST00000474281 NISCHQ9Y2I1 1504 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 GBF1Q92538 1859 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 A0A087WX48 190 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 J3KT08 172 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TIMM17BO60830 172 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 GADD45GO95257 159 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 DHFRP00374 187 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 C1QCP02747 245 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 MIFP14174 115 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TMBIM6P55061 237 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 RPS28P62857 69 aaKnown RBP2.01□□□□□ -2.09
PGK1-202ENST00000474281 TMEM155Q4W5P6 130 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 PATE2Q6UY27 113 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 PHF5AQ7RTV0 110 aaKnown RBP2.01□□□□□ -2.09
PGK1-202ENST00000474281 MAFIPQ8WZ33 124 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TXNDC17Q9BRA2 123 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 LINC00467Q9BRT7 94 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TTTY12Q9BZ98 90 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TRAPPC2LQ9UL33 140 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 HS3ST2Q9Y278 367 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 HEATR5BQ9P2D3 2071 aa2.01□□□□□ -2.09
PGK1-202ENST00000474281 TRAV36DV7A0A075B6V5 113 aa2□□□□□ -2.09
PGK1-202ENST00000474281 A0A1B0GX51 115 aa2□□□□□ -2.09
PGK1-202ENST00000474281 A8MWV9 139 aa2□□□□□ -2.09
PGK1-202ENST00000474281 OVOL1O14753 267 aa2□□□□□ -2.09
PGK1-202ENST00000474281 HIST1H2BKO60814 126 aa2□□□□□ -2.09
PGK1-202ENST00000474281 CST7O76096 145 aa2□□□□□ -2.09
PGK1-202ENST00000474281 HIST1H2BJP06899 126 aa2□□□□□ -2.09
PGK1-202ENST00000474281 GTF2A1P52655 376 aaPredicted RBP2□□□□□ -2.09
PGK1-202ENST00000474281 HBBP68871 147 aa2□□□□□ -2.09
PGK1-202ENST00000474281 ESRGQ1W209 222 aa2□□□□□ -2.09
PGK1-202ENST00000474281 C7orf65Q6ZTY9 151 aa2□□□□□ -2.09
PGK1-202ENST00000474281 SPANXCQ9NY87 97 aa2□□□□□ -2.09
PGK1-202ENST00000474281 DIDO1Q9BTC0 2240 aaKnown RBP2□□□□□ -2.09
PGK1-202ENST00000474281 PXDNLA1KZ92 1463 aa2□□□□□ -2.09
PGK1-202ENST00000474281 TANC2Q9HCD6 1990 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 FRMPD1Q5SYB0 1578 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 TRAV1-1A0A0B4J248 108 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 K7ERJ3 54 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 DEGS1O15121 323 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 ZNF737O75373 536 aa1.99□□□□□ -2.09
PGK1-202ENST00000474281 BAALC-AS2P0C853 105 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms