RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PPP1R14BQ96C90 147 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 C1QTNF4Q9BXJ3 329 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 TBC1D24Q9ULP9 559 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 STRAPQ9Y3F4 350 aaKnown RBP6.53□□□□□ -1.36
USF1-204ENST00000472217 HLA-DRB4X5D2U9 266 aa6.53□□□□□ -1.36
USF1-204ENST00000472217 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 ELOA3CA0A087WX78 387 aaPredicted RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 IL7P13232 177 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 ANXA7P20073 488 aaKnown RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 GATA2P23769 480 aaPredicted RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 ID1P41134 155 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PSMB3P49720 205 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PRR20EP86478 221 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PRR20CP86479 221 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PRR20DP86480 221 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PRR20BP86481 221 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 PRR20AP86496 221 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 AKR1C1Q04828 323 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 LGALS9CQ6DKI2 356 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 TMEM182Q6ZP80 229 aaPredicted RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 OR8I2Q8N0Y5 310 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 RPP25LQ8N5L8 163 aaKnown RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 OR4D5Q8NGN0 318 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 LINC00052Q96N35 136 aa6.52□□□□□ -1.37
USF1-204ENST00000472217 C7orf50Q9BRJ6 194 aaKnown RBP6.52□□□□□ -1.37
USF1-204ENST00000472217 CENPXA8MT69 81 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 C11orf94C9JXX5 98 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 SSSCA1O60232 199 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 DEDDO75618 318 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 CFDP00746 253 aaPredicted RBP6.51□□□□□ -1.37
USF1-204ENST00000472217 IFNA21P01568 189 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 ORM2P19652 201 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 LINC01559Q495D7 138 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 C4orf46Q504U0 113 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 Q6ZTC4 211 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 BPIFCQ8NFQ6 507 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 SLC25A32Q9H2D1 315 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 SAV1Q9H4B6 383 aaPredicted RBP6.51□□□□□ -1.37
USF1-204ENST00000472217 SLC25A22Q9H936 323 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 PSENENQ9NZ42 101 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 SLC45A2Q9UMX9 530 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
USF1-204ENST00000472217 SMCO3A2RU48 225 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 ZNF98A6NK75 572 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 PMS2P5A8MQ11 134 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 IGLL5B9A064 214 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 F6UB75 175 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 ISLRO14498 428 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 CCNKO75909 580 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 GALR1P47211 349 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 MEOX2P50222 304 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 PAX9P55771 341 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 FXYD7P58549 80 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 IAH1Q2TAA2 248 aaPredicted RBP6.5□□□□□ -1.37
USF1-204ENST00000472217 CYP2G1PQ6ZSU1 146 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 TMEM144Q7Z5S9 345 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 ZNF709Q8N972 641 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 OR4B1Q8NGF8 309 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 OR1B1Q8NGR6 318 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 SMIM8Q96KF7 97 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 C17orf77Q96MU5 243 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 DOK5Q9P104 306 aa6.5□□□□□ -1.37
USF1-204ENST00000472217 TRAV10A0A0B4J240 114 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 A0A0J9YX75 114 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 ZNF705FA8MVS1 300 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 H3BRN7 92 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 PLA2G10O15496 165 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 SCGB1D2O95969 90 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 IL5P05113 134 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 METTL15P1P0C7V9 234 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 ZNF705DP0CH99 300 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 ZNF705BP0CI00 300 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 TCTAP57738 103 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 RRAS2P62070 204 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 DLK1P80370 383 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 FAM78BQ5VT40 261 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 SAMD13Q5VXD3 122 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 SPATA31B1PQ5VZV4 182 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 TMEM14EPQ6UXP3 125 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 ZNF705AQ6ZN79 300 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 ZNF767PQ75MW2 155 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 ZBTB8BQ8NAP8 495 aaPredicted RBP6.49□□□□□ -1.37
USF1-204ENST00000472217 MITD1Q8WV92 249 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 C16orf92Q96LL3 132 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 GPR82Q96P67 336 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 NEU1Q99519 415 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 RSG1Q9BU20 258 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 TMEM147Q9BVK8 224 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 SCRT1Q9BWW7 348 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 C20orf85Q9H1P6 137 aa6.49□□□□□ -1.37
USF1-204ENST00000472217 RPRMQ9NS64 109 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms