RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 H7BYZ3 331 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 HLA-EP13747 358 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 ELOBQ15370 118 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 SPANXN5Q5MJ07 72 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 EIF5AL1Q6IS14 154 aaKnown RBP2.93□□□□□ -1.94
SMC5-202ENST00000471372 TOMM20LQ6UXN7 152 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
SMC5-202ENST00000471372 CROCCP2Q86T23 111 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 IFT20Q8IY31 132 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 Q8IYB0 196 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 THEM6Q8WUY1 208 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 BORCS8Q96FH0 119 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 ADAT1Q9BUB4 502 aaKnown RBP2.93□□□□□ -1.94
SMC5-202ENST00000471372 OTORQ9NRC9 128 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 ASB4Q9Y574 426 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 CCDC88CQ9P219 2028 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 ICE1Q9Y2F5 2266 aa2.93□□□□□ -1.94
SMC5-202ENST00000471372 CEP164Q9UPV0 1460 aa2.92□□□□□ -1.94
SMC5-202ENST00000471372 K7ERJ3 54 aa2.92□□□□□ -1.94
SMC5-202ENST00000471372 LAMTOR3Q9UHA4 124 aa2.92□□□□□ -1.94
SMC5-202ENST00000471372 GINS2Q9Y248 185 aa2.92□□□□□ -1.94
SMC5-202ENST00000471372 TRDV1A0A1B0GX56 115 aa2.91□□□□□ -1.94
SMC5-202ENST00000471372 RPL7P18124 248 aaKnown RBP2.91□□□□□ -1.94
SMC5-202ENST00000471372 SSR2P43308 183 aa2.91□□□□□ -1.94
SMC5-202ENST00000471372 DEFB103AP81534 67 aa2.91□□□□□ -1.94
SMC5-202ENST00000471372 PLCXD2Q0VAA5 305 aa2.91□□□□□ -1.94
SMC5-202ENST00000471372 STRCP1A6NGW2 1772 aa2.9□□□□□ -1.94
SMC5-202ENST00000471372 CRPP02741 224 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 BAALC-AS2P0C853 105 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 MIFP14174 115 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 AKR1C3P42330 323 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 MYL5Q02045 173 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 ALX1Q15699 326 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 COA5Q86WW8 74 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 PRR15Q8IV56 129 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 BATF3Q9NR55 127 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 HSPB11Q9Y547 144 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 VWDEQ8N2E2 1590 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 CAMSAP2Q08AD1 1489 aa2.9□□□□□ -1.95
SMC5-202ENST00000471372 MEIKINA0A087WXM9 373 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 FUOMA2VDF0 154 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 A8MWV9 139 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 UBL3O95164 117 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 S100A11P31949 105 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 HRCT1Q6UXD1 115 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 PATE2Q6UY27 113 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 FP248Q71RG6 208 aaPredicted RBP2.89□□□□□ -1.95
SMC5-202ENST00000471372 ANGPTL5Q86XS5 388 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 SKA2Q8WVK7 121 aaPredicted RBP2.89□□□□□ -1.95
SMC5-202ENST00000471372 Q96M85 177 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 CCDC115Q96NT0 180 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 HS3ST2Q9Y278 367 aa2.89□□□□□ -1.95
SMC5-202ENST00000471372 NUP210LQ5VU65 1888 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 CACNA1GO43497 2377 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 UBR2Q8IWV8 1755 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 GABARAPH6UMI1 98 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 BCL2P10415 239 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 POLR2HP52434 150 aaKnown RBP2.88□□□□□ -1.95
SMC5-202ENST00000471372 LINC00301Q8NCQ3 95 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 ISOC1Q96CN7 298 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 ZNF714Q96N38 554 aa2.88□□□□□ -1.95
SMC5-202ENST00000471372 ZCCHC11Q5TAX3 1644 aaKnown RBP2.87□□□□□ -1.95
SMC5-202ENST00000471372 HBBP68871 147 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 DEFB113Q30KQ7 82 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 LINC00311Q8N616 119 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 OR9Q1Q8NGQ5 310 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 C6orf62Q9GZU0 229 aaPredicted RBP2.87□□□□□ -1.95
SMC5-202ENST00000471372 NAT8BQ9UHF3 227 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 TRAPPC2LQ9UL33 140 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 LAMTOR2Q9Y2Q5 125 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 SCN8AQ9UQD0 1980 aa2.87□□□□□ -1.95
SMC5-202ENST00000471372 SBF1O95248 1867 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 C2orf70A6NJV1 201 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 LYZL6O75951 148 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 CST7O76096 145 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 ZNF705BP0CI00 300 aaPredicted RBP2.86□□□□□ -1.95
SMC5-202ENST00000471372 RPS3P23396 243 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMC5-202ENST00000471372 PCOTHQ58A44 107 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 C12orf29Q8N999 325 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 TMEM35BQ8NCS4 154 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 OR4K15Q8NH41 348 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
SMC5-202ENST00000471372 MED31Q9Y3C7 131 aa2.86□□□□□ -1.95
SMC5-202ENST00000471372 MDC1Q14676 2089 aaKnown RBP2.85□□□□□ -1.95
SMC5-202ENST00000471372 PROSCO94903 275 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 FAM107AO95990 144 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 KRTAP12-1P59990 96 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 PHF5AQ7RTV0 110 aaKnown RBP2.85□□□□□ -1.95
SMC5-202ENST00000471372 KRTAP13-1Q8IUC0 172 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 RETNLBQ9BQ08 111 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 LINC00467Q9BRT7 94 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 OR2H1Q9GZK4 316 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 C14orf132Q9NPU4 83 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 RGS12O14924 1447 aa2.85□□□□□ -1.95
SMC5-202ENST00000471372 GBF1Q92538 1859 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 TRAV5A0A0B4J249 113 aa2.84□□□□□ -1.95
SMC5-202ENST00000471372 B4DSR2 109 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms