RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ALX4Q9H161 411 aaPredicted RBP3.52□□□□□ -1.85
CKS1B-204ENST00000471245 VAX2Q9UIW0 290 aa3.52□□□□□ -1.85
CKS1B-204ENST00000471245 IGHV1-3A0A0C4DH29 117 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 A0A0J9YXV3 536 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 LOC107986453A0A1B0GWG9 222 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 A0A1W2PQL4 384 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 NUPR2A6NF83 97 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF729A6NN14 1252 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 ATF1P18846 271 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 RBP2P50120 134 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 GNG10P50151 68 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 CDC42P60953 191 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 PITPNAQ00169 270 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF816Q0VGE8 651 aaPredicted RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 PTGES3Q15185 160 aaKnown RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 LTC4SQ16873 150 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 SPIN3Q5JUX0 258 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 DHFR2Q86XF0 187 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 BOD1L2Q8IYS8 172 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 ENTHD1Q8IYW4 607 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 OR11H7Q8NGC8 314 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 OR51A4Q8NGJ6 313 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 UBALD1Q8TB05 177 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 CANT1Q8WVQ1 401 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 BORCS8Q96FH0 119 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 KCTD7Q96MP8 289 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 OR4C12Q96R67 309 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 SULT4A1Q9BR01 284 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 C7orf50Q9BRJ6 194 aaKnown RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 TMED9Q9BVK6 235 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 FAM107BQ9H098 131 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 TUBA4BQ9H853 241 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 EXOSC4Q9NPD3 245 aaKnown RBP3.51□□□□□ -1.85
CKS1B-204ENST00000471245 IDI2-AS1Q9NZ38 188 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 NAGKQ9UJ70 344 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 RAB26Q9ULW5 256 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 TMEM14AQ9Y6G1 99 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
CKS1B-204ENST00000471245 HERC1Q15751 4861 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 A0A0A6YYH2 397 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 A6NJ64 397 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF670-ZNF695F2Z2N8 137 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 G3V318 75 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 C15orf65H3BRN8 121 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 DNASE2O00115 360 aaPredicted RBP3.5□□□□□ -1.85
CKS1B-204ENST00000471245 MPZL2O60487 215 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 GATBO75879 557 aaKnown RBP3.5□□□□□ -1.85
CKS1B-204ENST00000471245 TNFAIP8O95379 198 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 PTTG1O95997 202 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 POLR2IP36954 125 aaKnown RBP3.5□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF266Q14584 549 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 NXNL2Q5VZ03 156 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 C12orf73Q69YU5 71 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 LGALS9CQ6DKI2 356 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 Q8IYB0 196 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 YIPF7Q8N8F6 280 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 CASTOR1Q8WTX7 329 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 C15orf40Q8WUR7 153 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 TIMM17AQ99595 171 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 RSG1Q9BU20 258 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 AMMECR1Q9Y4X0 333 aaPredicted RBP3.5□□□□□ -1.85
CKS1B-204ENST00000471245 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CKS1B-204ENST00000471245 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
CKS1B-204ENST00000471245 MEIKINA0A087WXM9 373 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 IGHV3-43A0A0B4J1X8 118 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 FAM240AA0A1B0GVK7 77 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 METTL15A6NJ78 407 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 OR4C45A6NMZ5 311 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 H0YJX3 145 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 J3QRE1 110 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 DEGS1O15121 323 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 SULT1C4O75897 302 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 CYB5AP00167 134 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 LGALS1P09382 135 aaKnown RBP3.49□□□□□ -1.85
CKS1B-204ENST00000471245 RD3LP0DJH9 198 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 DTYMKP23919 212 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 OR10A3P58181 314 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 CD164Q04900 197 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 PIGYQ3MUY2 71 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 Q6ZVH6 145 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 GAPTQ8N292 157 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 LINC00311Q8N616 119 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 ZNF439Q8NDP4 499 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 OR51A2Q8NGJ7 313 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 OR10K1Q8NGX5 313 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 HAVCR2Q8TDQ0 301 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 RTN4IP1Q8WWV3 396 aaPredicted RBP3.49□□□□□ -1.85
CKS1B-204ENST00000471245 PP6455Q8WZ26 134 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 SAMD10Q9BYL1 202 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 TOLLIPQ9H0E2 274 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 GLS2Q9UI32 602 aa3.49□□□□□ -1.85
CKS1B-204ENST00000471245 TRAV8-4A0A0B4J246 113 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 A0A0U1RQV1 116 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 TCRBV3S1A0A5B6 114 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 FUOMA2VDF0 154 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 SULT1C2O00338 296 aa3.48□□□□□ -1.85
CKS1B-204ENST00000471245 CRXO43186 299 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms