RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 OXA1LQ15070 435 aa11.97□□□□□ -0.49
GTF3C2-209ENST00000470115 PSMG4Q5JS54 123 aa11.97□□□□□ -0.49
GTF3C2-209ENST00000470115 ACTL10Q5JWF8 245 aa11.97□□□□□ -0.49
GTF3C2-209ENST00000470115 SIGLEC15Q6ZMC9 328 aa11.97□□□□□ -0.49
GTF3C2-209ENST00000470115 MGAT4CQ9UBM8 478 aa11.97□□□□□ -0.49
GTF3C2-209ENST00000470115 H3BP45 60 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 L7N2F9 121 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 VAMP2P63027 116 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 ID3Q02535 119 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 OR2F1Q13607 317 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 SPANXN5Q5MJ07 72 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 CEMP1Q6PRD7 247 aaPredicted RBP11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 RAB40CQ96S21 281 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 MED28Q9H204 178 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 NRN1Q9NPD7 142 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 PSENENQ9NZ42 101 aa11.96□□□□□ -0.49
GTF3C2-209ENST00000470115 IGKV1OR2-108A0A075B7D4 117 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 DEFB4AO15263 64 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 FABP1P07148 127 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 LYZP61626 148 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 OR8G2PQ6IF36 304 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 TRGV9Q99603 122 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 PFDN2Q9UHV9 154 aa11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 RCL1Q9Y2P8 373 aaKnown RBP11.95□□□□□ -0.5
GTF3C2-209ENST00000470115 PRSS46E5RG02 174 aa11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 PVALBP20472 110 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 NUP62P37198 522 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 SNRPD3P62318 126 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 LRRC37A5PQ49AS3 106 aa11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 MORN3Q6PF18 240 aaPredicted RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 THAP8Q8NA92 274 aa11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 C11orf68Q9H3H3 251 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 STRAPQ9Y3F4 350 aaKnown RBP11.94□□□□□ -0.5
GTF3C2-209ENST00000470115 K7EPK0 472 aa11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 SPP1P10451 314 aa11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 C4BPBP20851 252 aa11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 BCAP31P51572 246 aa11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 CYCSP99999 105 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 RAB32Q13637 225 aa11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 PHLDA1Q8WV24 401 aaPredicted RBP11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 SEPSECSQ9HD40 501 aaKnown RBP11.93□□□□□ -0.5
GTF3C2-209ENST00000470115 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 H2BFSP57053 126 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 TMEM41BQ5BJD5 291 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 C11orf45Q8TAV5 145 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 PPP1R14BQ96C90 147 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 SMIM8Q96KF7 97 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 NMES1Q9C002 83 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 KLK5Q9Y337 293 aaPredicted RBP11.92□□□□□ -0.5
GTF3C2-209ENST00000470115 RLN2P04090 185 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 CAV2P51636 162 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 FCN2Q15485 313 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 C1orf194Q5T5A4 169 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 Q8NAQ8 132 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 FBXL17Q9UF56 701 aa11.91□□□□□ -0.5
GTF3C2-209ENST00000470115 H3BMM0 161 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 CXCL3P19876 107 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 GATA2P23769 480 aaPredicted RBP11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 DEFB1P60022 68 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 AKR1C1Q04828 323 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 ACOT7LQ6ZUV0 252 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 OR8I2Q8N0Y5 310 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 CSNK1G2-AS1Q8NCQ2 148 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 LINC00052Q96N35 136 aa11.9□□□□□ -0.5
GTF3C2-209ENST00000470115 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 TSC22D2O75157 780 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 LY6G6CO95867 125 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 CFDP00746 253 aaPredicted RBP11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 METTL15P1P0C7V9 234 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 ID1P41134 155 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 PAX9P55771 341 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 TAS2R30P59541 319 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 TMEM182Q6ZP80 229 aaPredicted RBP11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 BPIFCQ8NFQ6 507 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 MFFQ9GZY8 342 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 X6R8D5 127 aa11.89□□□□□ -0.51
GTF3C2-209ENST00000470115 SMCO3A2RU48 225 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 HLA-DRB4P13762 266 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 ORM2P19652 201 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 IL15RAQ13261 267 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 GDF5OSQ5U4N7 250 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 TMEM144Q7Z5S9 345 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 OR11H7Q8NGC8 314 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 XCL2Q9UBD3 114 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 HLA-DRB4X5D2U9 266 aa11.88□□□□□ -0.51
GTF3C2-209ENST00000470115 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
GTF3C2-209ENST00000470115 PMS2P5A8MQ11 134 aa11.87□□□□□ -0.51
GTF3C2-209ENST00000470115 SOCS3O14543 225 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms