RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 IGLC7A0M8Q6 106 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 G3V318 75 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 ATP6V0E1O15342 81 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 EIF3GO75821 320 aaKnown RBP eCLIP13.66□□□□□ -0.22
MRPL28-208ENST00000469744 ACTL6BO94805 426 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 HOXD3P31249 432 aaPredicted RBP13.66□□□□□ -0.22
MRPL28-208ENST00000469744 FOXE3Q13461 319 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 C5orf64Q2M2E5 130 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 REC114Q7Z4M0 266 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 PPP1R27Q86WC6 154 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 ABHD5Q8WTS1 349 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
MRPL28-208ENST00000469744 IGHV7-81A0A0B4J1V7 117 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 C11orf94C9JXX5 98 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 CORTO00230 105 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 IGF1P05019 195 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 CRYGCP07315 174 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 OR5G3P0C626 314 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 GCHFRP30047 84 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 OR10J1P30954 320 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 C10orf55Q5SWW7 151 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 GATAD1Q8WUU5 269 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 MRPL32Q9BYC8 188 aaKnown RBP13.65□□□□□ -0.22
MRPL28-208ENST00000469744 FBXL15Q9H469 300 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 TPSG1Q9NRR2 321 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 METTL1Q9UBP6 276 aaKnown RBP13.65□□□□□ -0.22
MRPL28-208ENST00000469744 FUT9Q9Y231 359 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 DNAH3Q8TD57 4116 aa13.65□□□□□ -0.22
MRPL28-208ENST00000469744 IGKV1OR2-108A0A075B7D4 117 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 NDUFA3O95167 84 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 IGHG4P01861 327 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 ELANEP08246 267 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 RAB5AP20339 215 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 RND2P52198 227 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 KRTAP10-11P60412 298 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 RAB5BP61020 215 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 SELENOTP62341 195 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 NDPQ00604 133 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 NPBQ8NG41 125 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 PARLQ9H300 379 aa13.64□□□□□ -0.23
MRPL28-208ENST00000469744 TECRQ9NZ01 308 aaKnown RBP13.64□□□□□ -0.23
MRPL28-208ENST00000469744 C1orf196B1AJZ1 125 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 CCL24O00175 119 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 DEFA4P12838 97 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 MYCNOSP40205 109 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 PLGLAQ15195 96 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 TNXAQ16473 311 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 RNF152Q8N8N0 203 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 OR1P1Q8NH06 330 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 ISOC2Q96AB3 205 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 KLK15Q9H2R5 256 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 TMEM167BQ9NRX6 74 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 DOK5Q9P104 306 aa13.63□□□□□ -0.23
MRPL28-208ENST00000469744 AREGP15514 252 aa13.62□□□□□ -0.23
MRPL28-208ENST00000469744 PSMB8P28062 276 aa13.62□□□□□ -0.23
MRPL28-208ENST00000469744 TAS2R45P59539 299 aa13.62□□□□□ -0.23
MRPL28-208ENST00000469744 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
MRPL28-208ENST00000469744 FAM24BQ8N5W8 94 aa13.62□□□□□ -0.23
MRPL28-208ENST00000469744 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
MRPL28-208ENST00000469744 TRAV41A0A0B4J266 112 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 FCN1O00602 326 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 CTRB1P17538 263 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 PPIFP30405 207 aaKnown RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 CDX1P47902 265 aaPredicted RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 MLANAQ16655 118 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 ECSCRQ19T08 205 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 OR1L4Q8NGR5 311 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 RPUSD4Q96CM3 377 aaKnown RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 PFDN5Q99471 154 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 FNDC4Q9H6D8 234 aaPredicted RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 ZNF580Q9UK33 172 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 TEX22C9J3V5 150 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 CX3CL1P78423 397 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 OR5B12Q96R08 314 aa13.61□□□□□ -0.23
MRPL28-208ENST00000469744 F11RQ9Y624 299 aaKnown RBP13.61□□□□□ -0.23
MRPL28-208ENST00000469744 WI2-2373I1.2A0A1W2PRP0 233 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 K7EIL1 84 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 TGOLN2O43493 480 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 NPPCP23582 126 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 GNB1P62873 340 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 ELOBQ15370 118 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 SPATA31B1PQ5VZV4 182 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 MIR17HGQ75NE6 70 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 OR1L6Q8NGR2 347 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 C4orf3Q8WVX3 66 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 C11orf52Q96A22 123 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 ANAPC16Q96DE5 110 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 ACY3Q96HD9 319 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 TRGV9Q99603 122 aa13.6□□□□□ -0.23
MRPL28-208ENST00000469744 FAM103A1Q9BTL3 118 aaKnown RBP13.6□□□□□ -0.23
MRPL28-208ENST00000469744 GNB4Q9HAV0 340 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms