RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 OR5H6Q8NGV6 325 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 OR4X1Q8NH49 305 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 RXFP4Q8TDU9 374 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 DEFB104AQ8WTQ1 72 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 UFD1Q92890 307 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 VSIG2Q96IQ7 327 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 IGF2BP2-AS1Q96M15 143 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 TMEM208Q9BTX3 173 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 CENPOQ9BU64 300 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 MND1Q9BWT6 205 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 FXYD6Q9H0Q3 95 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 S100A14Q9HCY8 104 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 NOP10Q9NPE3 64 aaKnown RBP3.55□□□□□ -1.84
PTPN4-209ENST00000469511 C11orf21Q9P2W6 132 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 HSPB7Q9UBY9 170 aa3.55□□□□□ -1.84
PTPN4-209ENST00000469511 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 A0A0G2JRQ6 117 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 A8MTW9 85 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 CIB2O75838 187 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 ARL6IP5O75915 188 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 IGKV1-5P01602 117 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 HTN1P15515 57 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OPRK1P41145 380 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 ASIPP42127 132 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 HNRNPA3P51991 378 aaKnown RBP3.54□□□□□ -1.84
PTPN4-209ENST00000469511 RND2P52198 227 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 AP2S1P53680 142 aaPredicted RBP3.54□□□□□ -1.84
PTPN4-209ENST00000469511 ERHP84090 104 aaKnown RBP3.54□□□□□ -1.84
PTPN4-209ENST00000469511 KCTD21Q4G0X4 260 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 C10orf25Q5T742 122 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 ZFP1Q6P2D0 407 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 PRSS54Q6PEW0 395 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 DHRSXQ8N5I4 330 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OR11H7Q8NGC8 314 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OR51G1Q8NGK1 321 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OR4C16Q8NGL9 310 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OR6F1Q8NGZ6 308 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 OR4A16Q8NH70 328 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 ZNF2Q9BSG1 426 aaPredicted RBP3.54□□□□□ -1.84
PTPN4-209ENST00000469511 TMEM70Q9BUB7 260 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 SLC25A39Q9BZJ4 359 aaPredicted RBP3.54□□□□□ -1.84
PTPN4-209ENST00000469511 SCPEP1Q9HB40 452 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 FKBP11Q9NYL4 201 aa3.54□□□□□ -1.84
PTPN4-209ENST00000469511 LRCOL1A6NCL2 159 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 SIVA1O15304 175 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 GAGE7O76087 117 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 NXPH4O95158 308 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 SCGB1D1O95968 90 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 OXTP01178 125 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 PMP2P02689 132 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 GAGE12FP0CL80 117 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 GAGE12GP0CL81 117 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 GAGE12IP0CL82 117 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 PSG1P11464 419 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 RAB3BP20337 219 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 M6PRP20645 277 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 UCP1P25874 307 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 TNFSF8P32971 234 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 SNCAP37840 140 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 TBCEQ15813 527 aaPredicted RBP3.53□□□□□ -1.84
PTPN4-209ENST00000469511 BSXQ3C1V8 233 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 LINC01620Q4KN68 170 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 MORN5Q5VZ52 161 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 H2BFWTQ7Z2G1 175 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 TBC1D26Q86UD7 250 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 ARRDC1Q8N5I2 433 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 OR5AP2Q8NGF4 316 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 MPLKIPQ8TAP9 179 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 Q8WTZ3 238 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 IL22RA2Q969J5 263 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 SLC25A38Q96DW6 304 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 NARS2Q96I59 477 aaKnown RBP3.53□□□□□ -1.84
PTPN4-209ENST00000469511 AAMDCQ9H7C9 122 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 EHFQ9NZC4 300 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 MSRB1Q9NZV6 116 aa3.53□□□□□ -1.84
PTPN4-209ENST00000469511 IGLV5-52A0A0A0MRZ9 124 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TRAV1-2A0A0B4J238 106 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 GAGE12JA6NER3 117 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 GPR31O00270 319 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 CASQ2O14958 399 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 TSPOP30536 169 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 OR10J1P30954 320 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 RPL5P46777 297 aaKnown RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 HOXA1P49639 335 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 PSMB3P49720 205 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 EIF2B2P49770 351 aaKnown RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 CNN1P51911 297 aaKnown RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 YPEL3P61236 119 aaPredicted RBP3.52□□□□□ -1.85
PTPN4-209ENST00000469511 HERV-K104P61576 105 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 WFDC2Q14508 124 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 ARL6IP1Q15041 203 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 C22orf42Q6IC83 251 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 EBLN2Q6P2I7 272 aa3.52□□□□□ -1.85
PTPN4-209ENST00000469511 DHRS11Q6UWP2 260 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms