RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PPBPP02775 128 aa7.6□□□□□ -1.19
SCAF11-205ENST00000465950 RHOHQ15669 191 aa7.6□□□□□ -1.19
SCAF11-205ENST00000465950 C11orf45Q8TAV5 145 aa7.6□□□□□ -1.19
SCAF11-205ENST00000465950 S4R3C0 116 aa7.6□□□□□ -1.19
SCAF11-205ENST00000465950 IBA57Q5T440 356 aaKnown RBP7.6□□□□□ -1.19
SCAF11-205ENST00000465950 NRGNQ92686 78 aa7.6□□□□□ -1.19
SCAF11-205ENST00000465950 TRBV20OR9-2A0A075B6H5 130 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 A0A1W2PP11 408 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 FCN3O75636 299 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 AWAT1Q58HT5 328 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 FER1L6-AS1Q8NA97 138 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 F8W735 103 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-205ENST00000465950 J3QR89 54 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 TMEM183BQ1AE95 376 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 FAM89BQ8N5H3 189 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 C20orf144Q9BQM9 153 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 TMEM183AQ8IXX5 376 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 TTC9CQ8N5M4 171 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 SIGLEC8Q9NYZ4 499 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 FLVCR2Q9UPI3 526 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 K7EMT4 169 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 NDUFS7O75251 213 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 ATP5LO75964 103 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 FSHBP01225 129 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 CD74P04233 296 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 IGHV4-38-2P0DP08 117 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 IGFBP3P17936 291 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-205ENST00000465950 LYZL4Q96KX0 146 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 Q9H3A6 140 aa7.59□□□□□ -1.19
SCAF11-205ENST00000465950 A0A1W2PNU3 283 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-205ENST00000465950 VWC2LB2RUY7 222 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 HNRNPA3P51991 378 aaKnown RBP7.58□□□□□ -1.2
SCAF11-205ENST00000465950 LHFPL4Q7Z7J7 247 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 FOLR2P14207 255 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 GATA2P23769 480 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-205ENST00000465950 GCHFRP30047 84 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 XCL2Q9UBD3 114 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 LINC00862A6NCI5 91 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 SRRM4A7MD48 611 aaKnown RBP7.58□□□□□ -1.2
SCAF11-205ENST00000465950 STAG3L2P0CL84 134 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 IER3P46695 156 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
SCAF11-205ENST00000465950 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 TMEM37Q8WXS4 190 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 C19orf84I3L1E1 186 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 Q6P435 159 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 TMEM91Q6ZNR0 172 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 LYPD6Q86Y78 171 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 ODF3L1Q8IXM7 274 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 C1orf43Q9BWL3 253 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 NPCDR1Q9BY65 106 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 C4orf48Q5BLP8 95 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 Q6ZNX1 250 aa7.58□□□□□ -1.2
SCAF11-205ENST00000465950 DOCK8Q8NF50 2099 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 CCDC88CQ9P219 2028 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 TRAV3A0A0B4J244 114 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 ZNF747Q9BV97 191 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 VCX2Q9H322 139 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 SMPXQ9UHP9 88 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 ADMP35318 185 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 CDKN1BP46527 198 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 JOSD1Q15040 202 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-205ENST00000465950 C12orf57Q99622 126 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 PYGO2Q9BRQ0 406 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 ZFC3H1O60293 1989 aaKnown RBP7.57□□□□□ -1.2
SCAF11-205ENST00000465950 TRAV8-1A0A0A6YYK1 113 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 TRAV10A0A0B4J240 114 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 PEX7O00628 323 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 SELLP14151 372 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 CCKARP32238 428 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 PARP12Q9H0J9 701 aaKnown RBP7.57□□□□□ -1.2
SCAF11-205ENST00000465950 MEGF9Q9H1U4 602 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 C5orf66Q9H5L9 145 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 SPTBN1Q01082 2364 aaKnown RBP7.57□□□□□ -1.2
SCAF11-205ENST00000465950 PSMB2P49721 201 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 PET117Q6UWS5 81 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
SCAF11-205ENST00000465950 P0DMU3 169 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 FAM231AP0DMU4 169 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 FAM231CP0DMU5 169 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 AZU1P20160 251 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 ERCC8Q13216 396 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 RNF138Q8WVD3 245 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 A0A1B0GW64 132 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 RUNX1Q01196 453 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 TBX15Q96SF7 602 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 CKAP5Q14008 2032 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 A6NDX4 124 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 FHITP49789 147 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-205ENST00000465950 GLMPQ8WWB7 406 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 TOMM7Q9P0U1 55 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 ARHGEF17Q96PE2 2063 aaPredicted RBP7.56□□□□□ -1.2
SCAF11-205ENST00000465950 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 IGHG2P01859 326 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 ZNF345Q14585 488 aa7.56□□□□□ -1.2
SCAF11-205ENST00000465950 ORMDL2Q53FV1 153 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms