RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 EXOC3-AS1Q8N2X6 119 aa10.09□□□□□ -0.79
CLCNKA-204ENST00000464764 TMEM116Q8NCL8 245 aa10.09□□□□□ -0.79
CLCNKA-204ENST00000464764 TPPP3Q9BW30 176 aa10.09□□□□□ -0.79
CLCNKA-204ENST00000464764 MAP1LC3CQ9BXW4 147 aa10.09□□□□□ -0.79
CLCNKA-204ENST00000464764 KLF12Q9Y4X4 402 aa10.09□□□□□ -0.79
CLCNKA-204ENST00000464764 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 GAGE12BA1L429 117 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 PPIAL4DF5H284 164 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 SAP30O75446 220 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 FAM222BQ8WU58 562 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 CHCHD1Q96BP2 118 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 SARAFQ96BY9 339 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 Q9H3A6 140 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 MED13LQ71F56 2210 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 PRR33A8MZF0 331 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF788Q6ZQV5 615 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 RBPMS2Q6ZRY4 209 aaKnown RBP10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF833PQ6ZTB9 187 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 PRNTQ86SH4 94 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 OSR1Q8TAX0 266 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 TCRAP04437 139 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 COL8A1P27658 744 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 ARF6P62330 175 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 UBALD2Q8IYN6 164 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 NEU4Q8WWR8 484 aaPredicted RBP10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 SSUH2Q9Y2M2 353 aa10.08□□□□□ -0.8
CLCNKA-204ENST00000464764 LTAP01374 205 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 C12orf54Q6X4T0 127 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 C2orf91Q6ZV80 131 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF785A8K8V0 405 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 CD59P13987 128 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 HTR1DP28221 377 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 GPR183P32249 361 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 ATP5IP56385 69 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 LOXL1Q08397 574 aaPredicted RBP10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 OR5AN1Q8NGI8 311 aa10.07□□□□□ -0.8
CLCNKA-204ENST00000464764 ENSAO43768 121 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 APOHP02749 345 aaPredicted RBP10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 PPBPP02775 128 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 LIPFP07098 398 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 ARMS2P0C7Q2 107 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 GLRXP35754 106 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 WFDC8Q8IUA0 241 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 OR10X1Q8NGY0 326 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 PERPQ96FX8 193 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 RAB9BQ9NP90 201 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 BDP1A6H8Y1 2624 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 IGLV2-23P01705 113 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 THAP8Q8NA92 274 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
CLCNKA-204ENST00000464764 LOC389332A0A1B0GUA5 103 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 C7orf71A4D174 169 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 OVOL3O00110 214 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 OR5AL1P0C617 328 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 GP9P14770 177 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 CNTFRP26992 372 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 TMEM167AQ8TBQ9 72 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 C17orf77Q96MU5 243 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 NDFIP1Q9BT67 221 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 FAM231BA6NCW3 169 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 HLA-DRB1P01911 266 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 OR4C13Q8NGP0 309 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 CD5LO43866 347 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 MRGPRG-AS1Q2M3A8 158 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 PET117Q6UWS5 81 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 RAB37Q96AX2 223 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 NCOR1P1Q9H4R4 102 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 LINC00574Q9H8X3 128 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 HILPDAQ9Y5L2 63 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 PIEZO2Q9H5I5 2752 aa10.05□□□□□ -0.8
CLCNKA-204ENST00000464764 A0A1W2PRD5 423 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 A0A1W2PRF3 423 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 A0A1W2PRM7 423 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 SUB1P53999 127 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 HIST1H1AQ02539 215 aaPredicted RBP10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 OR8A1Q8NGG7 326 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 FMC1Q96HJ9 113 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 MEGF9Q9H1U4 602 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 IGLV3-9A0A075B6K5 115 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 IGLV2-11P01706 119 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 LINC01545Q5VT33 79 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 ZNF747Q9BV97 191 aa10.04□□□□□ -0.8
CLCNKA-204ENST00000464764 GATA4P43694 442 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 LYZP61626 148 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 FAM27E3Q08E93 113 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 LINC00312Q9Y6C7 94 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 TM4SF5O14894 197 aa10.03□□□□□ -0.8
CLCNKA-204ENST00000464764 IFI27P40305 119 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms