RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 TRAPPC8Q9Y2L5 1435 aa2.23□□□□□ -2.05
USP25-207ENST00000464435 BICRAQ9NZM4 1560 aa2.23□□□□□ -2.05
USP25-207ENST00000464435 MYH7BA7E2Y1 1941 aa2.23□□□□□ -2.05
USP25-207ENST00000464435 LCTP09848 1927 aa2.23□□□□□ -2.05
USP25-207ENST00000464435 A2MP01023 1474 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 A0A0J9YX75 114 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 C7orf71A4D174 169 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 CCDC160A6NGH7 325 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 J3QQQ9 107 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 J3QR89 54 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 K7EP13 123 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 HIST1H2BKO60814 126 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 C1QCP02747 245 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 IFNA4P05014 189 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 HIST1H2BJP06899 126 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 PAEPP09466 180 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 RNASE4P34096 147 aaKnown RBP2.22□□□□□ -2.05
USP25-207ENST00000464435 HBBP68871 147 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 NDUFA5Q16718 116 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 PABPC1L2AQ5JQF8 200 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 TEX29Q8N6K0 151 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 SLC30A7Q8NEW0 376 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 WFDC11Q8NEX6 87 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 OR4E2Q8NGC2 313 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 OR5D16Q8NGK9 328 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 C1orf54Q8WWF1 131 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 PRADC1Q9BSG0 188 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 HHLA3Q9XRX5 114 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 RNF11Q9Y3C5 154 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 CCDC88AQ3V6T2 1871 aa2.22□□□□□ -2.05
USP25-207ENST00000464435 CEP164Q9UPV0 1460 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 IGHV1-58A0A0C4DH39 117 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 TRBV10-2A0A0K0K1G8 114 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 LOC107984640A0A0U1RRK4 108 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 A0A1B0GV90 55 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 A0A1B0GW64 132 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 K7ERJ3 54 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 SDCBPO00560 298 aaPredicted RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 OBSL1O75147 1896 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 P0DMU3 169 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 FAM231AP0DMU4 169 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 FAM231CP0DMU5 169 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 DEFA4P12838 97 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 HLA-EP13747 358 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 FXYD2P54710 66 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 HIST1H1AQ02539 215 aaPredicted RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 RELAQ04206 551 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 RIC1Q4ADV7 1423 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 FAM27BQ5VT28 67 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 SOSTDC1Q6X4U4 206 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 LRRC28Q86X40 367 aaPredicted RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 BRK1Q8WUW1 75 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 MRPS24Q96EL2 167 aaKnown RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 ZC2HC1AQ96GY0 325 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 NYNRINQ9P2P1 1898 aaKnown RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 HS3ST2Q9Y278 367 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 HSPE1-MOB4S4R3N1 261 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 COL5A1P20908 1838 aaPredicted RBP2.21□□□□□ -2.06
USP25-207ENST00000464435 PIK3C2AO00443 1686 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 PTPRSQ13332 1948 aa2.21□□□□□ -2.06
USP25-207ENST00000464435 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 A0A096LPI6 279 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 TRAV13-1A0A0B4J241 112 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 APOC1P02654 83 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 MT-ND6P03923 174 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 HTR1AP08908 422 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 COX6A1P12074 109 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 EVI2AP22794 236 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 FOXF1Q12946 379 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 HCP5Q6MZN7 132 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 AAED1Q7RTV5 226 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 OR4K15Q8NH41 348 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 CMTM2Q8TAZ6 248 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 AQP3Q92482 292 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 MAGOHBQ96A72 148 aaKnown RBP2.2□□□□□ -2.06
USP25-207ENST00000464435 CBLN4Q9NTU7 201 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 NHP2Q9NX24 153 aaKnown RBP2.2□□□□□ -2.06
USP25-207ENST00000464435 BAIAP2Q9UQB8 552 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 N4BP2Q86UW6 1770 aaPredicted RBP2.2□□□□□ -2.06
USP25-207ENST00000464435 ANKRD31Q8N7Z5 1873 aa2.2□□□□□ -2.06
USP25-207ENST00000464435 TRBV7-6A0A0J9YX20 115 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 RER1O15258 196 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 MT-ND4LP03901 98 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 ZNF705BP0CI00 300 aaPredicted RBP2.19□□□□□ -2.06
USP25-207ENST00000464435 CRYGAP11844 174 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 HINT1P49773 126 aaPredicted RBP2.19□□□□□ -2.06
USP25-207ENST00000464435 DNAJB13P59910 316 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 TMEM258P61165 79 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 NCS1P62166 190 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 DYNLT1P63172 113 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 WHAMMP3Q1A5X7 153 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 OR5H6Q8NGV6 325 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 ZNF471Q9BX82 626 aaPredicted RBP2.19□□□□□ -2.06
USP25-207ENST00000464435 OR5AC2Q9NZP5 309 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 RIMBP3CA6NJZ7 1639 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 RIMBP3BA6NNM3 1639 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 RIMBP3Q9UFD9 1639 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 WDR90Q96KV7 1748 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 GREB1Q4ZG55 1949 aa2.19□□□□□ -2.06
USP25-207ENST00000464435 OVOS2A0A0J9YW53 1432 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms