RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 BATF3Q9NR55 127 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 OTORQ9NRC9 128 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 HSPB11Q9Y547 144 aa1.73□□□□□ -2.13
GPNMB-205ENST00000463011 DISP1Q96F81 1524 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 MEIKINA0A087WXM9 373 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 GABARAPH6UMI1 98 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 RPL7P18124 248 aaKnown RBP1.72□□□□□ -2.13
GPNMB-205ENST00000463011 S100A11P31949 105 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 AKR1C3P42330 323 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 SSR2P43308 183 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 Q1T7F1 81 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 LCE3AQ5TA76 89 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 Q8IYB0 196 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 ZNF418Q8TF45 676 aaPredicted RBP1.72□□□□□ -2.13
GPNMB-205ENST00000463011 CCDC115Q96NT0 180 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 C6orf62Q9GZU0 229 aaPredicted RBP1.72□□□□□ -2.13
GPNMB-205ENST00000463011 RNF11Q9Y3C5 154 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 MALRD1Q5VYJ5 2156 aa1.72□□□□□ -2.13
GPNMB-205ENST00000463011 ARHGEF28Q8N1W1 1705 aaKnown RBP1.71□□□□□ -2.13
GPNMB-205ENST00000463011 NCAPD3P42695 1498 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 ZCCHC11Q5TAX3 1644 aaKnown RBP1.71□□□□□ -2.14
GPNMB-205ENST00000463011 A8MWV9 139 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 CST7O76096 145 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 PROSCO94903 275 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 UBL3O95164 117 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 FAM107AO95990 144 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 BAALC-AS2P0C853 105 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 BCL2P10415 239 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 MIFP14174 115 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 POLR2HP52434 150 aaKnown RBP1.71□□□□□ -2.14
GPNMB-205ENST00000463011 DEFB103AP81534 67 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 COA5Q86WW8 74 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 PRR15Q8IV56 129 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 OR9Q1Q8NGQ5 310 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
GPNMB-205ENST00000463011 ISOC1Q96CN7 298 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 AIF1LQ9BQI0 150 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 TRAPPC2LQ9UL33 140 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 HS3ST2Q9Y278 367 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 LAMTOR2Q9Y2Q5 125 aa1.71□□□□□ -2.14
GPNMB-205ENST00000463011 FHAD1B1AJZ9 1412 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 HIST1H2BKO60814 126 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 HIST1H2BJP06899 126 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 ZNF705BP0CI00 300 aaPredicted RBP1.7□□□□□ -2.14
GPNMB-205ENST00000463011 HBBP68871 147 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 PATE2Q6UY27 113 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 FP248Q71RG6 208 aaPredicted RBP1.7□□□□□ -2.14
GPNMB-205ENST00000463011 LINC00311Q8N616 119 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 C12orf29Q8N999 325 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 TMEM35BQ8NCS4 154 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 OR4K15Q8NH41 348 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 LINC00467Q9BRT7 94 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 OR2H1Q9GZK4 316 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 NAT8BQ9UHF3 227 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 MED31Q9Y3C7 131 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 STRCQ7RTU9 1775 aa1.7□□□□□ -2.14
GPNMB-205ENST00000463011 TRAV14DV4A0A0A6YYC5 116 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 TRAV5A0A0B4J249 113 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 C2orf70A6NJV1 201 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 IFNA4P05014 189 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 FABP2P12104 132 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 RPS3P23396 243 aaKnown RBP eCLIP1.69□□□□□ -2.14
GPNMB-205ENST00000463011 RPL35P42766 123 aaKnown RBP1.69□□□□□ -2.14
GPNMB-205ENST00000463011 EIF3IQ13347 325 aaKnown RBP1.69□□□□□ -2.14
GPNMB-205ENST00000463011 DEFB113Q30KQ7 82 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 Q6ZRN7 208 aaPredicted RBP1.69□□□□□ -2.14
GPNMB-205ENST00000463011 Q96M85 177 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 DENND4CQ5VZ89 1909 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 CUL9Q8IWT3 2517 aa1.69□□□□□ -2.14
GPNMB-205ENST00000463011 RGS12O14924 1447 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 ARL5CA6NH57 179 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 J3KT08 172 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 RER1O15258 196 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 LYZL6O75951 148 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 GPX1P07203 203 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 SCGB1A1P11684 91 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 KLRD1Q13241 179 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 KRTAP6-3Q3LI67 103 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 OR2T35Q8NGX2 323 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 CACYBPQ9HB71 228 aaKnown RBP1.68□□□□□ -2.14
GPNMB-205ENST00000463011 MYH11P35749 1972 aa1.68□□□□□ -2.14
GPNMB-205ENST00000463011 BCL9O00512 1426 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 B4DSR2 109 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 OVOL1O14753 267 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 ARPC5O15511 151 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 OR1I1O60431 355 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 MT-ND6P03923 174 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 BRS3P32247 399 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 SDC2P34741 201 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 RAB4BP61018 213 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 PHF5AQ7RTV0 110 aaKnown RBP1.67□□□□□ -2.14
GPNMB-205ENST00000463011 RPS19BP1Q86WX3 136 aaKnown RBP1.67□□□□□ -2.14
GPNMB-205ENST00000463011 OR5D16Q8NGK9 328 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 SFT2D1Q8WV19 159 aa1.67□□□□□ -2.14
GPNMB-205ENST00000463011 POP5Q969H6 163 aaKnown RBP1.67□□□□□ -2.14
GPNMB-205ENST00000463011 CHCHD1Q96BP2 118 aaKnown RBP1.67□□□□□ -2.14
GPNMB-205ENST00000463011 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
GPNMB-205ENST00000463011 TCEAL2Q9H3H9 227 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms