RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 LDLRAD2Q5SZI1 272 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 FAM120AOSQ5T036 256 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 PVRIGQ6DKI7 326 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 LAIR2Q6ISS4 152 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 ZNF773Q6PK81 442 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 FBXW12Q6X9E4 464 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 NEGR1Q7Z3B1 354 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 SNX29P2Q8IUI4 249 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 OR4M1Q8NGD0 313 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 OR2G3Q8NGZ4 309 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 RPS4Y2Q8TD47 263 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 THEM6Q8WUY1 208 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 SPTSSAQ969W0 71 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 HIST1H2BAQ96A08 127 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 PSMG3Q9BT73 122 aaPredicted RBP2.8□□□□□ -1.96
UBA3-204ENST00000461522 OR2D2Q9H210 308 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 OR51I2Q9H344 312 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 ESM1Q9NQ30 184 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 KCNIP1Q9NZI2 227 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 LAMTOR2Q9Y2Q5 125 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 NOP16Q9Y3C1 178 aaKnown RBP2.8□□□□□ -1.96
UBA3-204ENST00000461522 LHFPL6Q9Y693 200 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 V9GYS6 101 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 FLNBO75369 2602 aaKnown RBP2.8□□□□□ -1.96
UBA3-204ENST00000461522 SPG11Q96JI7 2443 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 ICE1Q9Y2F5 2266 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 RTTNQ86VV8 2226 aa2.8□□□□□ -1.96
UBA3-204ENST00000461522 SPENQ96T58 3664 aaKnown RBP2.8□□□□□ -1.96
UBA3-204ENST00000461522 ROS1P08922 2347 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CADP27708 2225 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 FREM1Q5H8C1 2179 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 IGLV3-9A0A075B6K5 115 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 TRAV8-4A0A0B4J246 113 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 TRAV39A0A0B4J263 110 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 TRAV38-1A0A0B4J264 116 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 IGHV1-18A0A0C4DH31 117 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 FAM236DA0A1B0GTK5 79 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 hADV38S2A0JD32 116 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 NCBP2LA6PVI3 153 aaKnown RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 A8MWP6 167 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF670-ZNF695F2Z2N8 137 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 H7C417 338 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 AIPO00170 330 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 RER1O15258 196 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 RBFOX2O43251 390 aaKnown RBP eCLIP2.79□□□□□ -1.96
UBA3-204ENST00000461522 MMP23AO75900 390 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 NDUFC2O95298 119 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 LALBAP00709 142 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 IGLV3-1P01715 115 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 P01737 135 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 APOC3P02656 99 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CECR9P0C854 216 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 P0C879 139 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 SMIM17P0DL12 118 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 FAM236CP0DP71 79 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 PSG2P11465 335 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 COX6B1P14854 86 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF32P17041 273 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CXCL2P19875 107 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CXCL3P19876 107 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CCL1P22362 96 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 EVI2AP22794 236 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 CRHBPP24387 322 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 SRIP30626 198 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 G6PCP35575 357 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 GABARAPL2P60520 117 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 RND3P61587 244 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 HIST1H1AQ02539 215 aaPredicted RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF85Q03923 595 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF154Q13106 437 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 GUCA2BQ16661 112 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 SCGB2B2Q4G0G5 96 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 EIF5AL1Q6IS14 154 aaKnown RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF322Q6U7Q0 402 aaPredicted RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 MDP1Q86V88 176 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 H1FOOQ8IZA3 346 aaPredicted RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 FTMTQ8N4E7 242 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 TCTEX1D1Q8N7M0 179 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 BPIFB6Q8NFQ5 453 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 OR11H6Q8NGC7 330 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 OR5A2Q8NGI9 324 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 OR51G1Q8NGK1 321 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 OR13C8Q8NGS7 320 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 OR10R2Q8NGX6 335 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 LINC01006Q8NI28 216 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 VN1R17PQ8TDU5 208 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF418Q8TF45 676 aaPredicted RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 SLAMF6Q96DU3 332 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 KIR2DL4Q99706 377 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 NDFIP1Q9BT67 221 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 ZNF471Q9BX82 626 aaPredicted RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 SNHG12Q9BXW3 62 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 RNASE7Q9H1E1 156 aaKnown RBP2.79□□□□□ -1.96
UBA3-204ENST00000461522 PLEKHF2Q9H8W4 249 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 HES4Q9HCC6 221 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 UQCC1Q9NVA1 299 aa2.79□□□□□ -1.96
UBA3-204ENST00000461522 RBFOX1Q9NWB1 397 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms