RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 GATA4P43694 442 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 CHCHD1Q96BP2 118 aaKnown RBP12.03□□□□□ -0.48
PTPRU-205ENST00000460170 EP400Q96L91 3159 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 PCNX2A6NKB5 2137 aa12.03□□□□□ -0.48
PTPRU-205ENST00000460170 H7C2G1 150 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 KLRD1Q13241 179 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 RRN3P1Q2M238 152 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 LYPD6Q86Y78 171 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 PPBPP02775 128 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 SMIM13P0DJ93 91 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 RPRMLQ8N4K4 120 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.48
PTPRU-205ENST00000460170 GZMBP10144 247 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 C5orf64Q2M2E5 130 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 KLF17Q5JT82 389 aaPredicted RBP12.02□□□□□ -0.49
PTPRU-205ENST00000460170 VMO1Q7Z5L0 202 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 DTX1Q86Y01 620 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 NCOR1P1Q9H4R4 102 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 HBDP02042 147 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 COX6CP09669 75 aa12.02□□□□□ -0.49
PTPRU-205ENST00000460170 TGFAP01135 160 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 PAX1P15863 534 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 MINOS1Q5TGZ0 78 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 ZNRD1Q9P1U0 126 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 MINOS1-NBL1R4GNA1 71 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 NPIPB5A8MRT5 1133 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
PTPRU-205ENST00000460170 LY6DQ14210 128 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 LINC00469Q8N7U9 141 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 PFN1P07737 140 aaKnown RBP12.01□□□□□ -0.49
PTPRU-205ENST00000460170 LEPP41159 167 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 C19orf54Q5BKX5 351 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 SSC4DQ8WTU2 575 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 MED13LQ71F56 2210 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 EFNA4P52798 201 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
PTPRU-205ENST00000460170 E7EQL1 145 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 H7C1H1 209 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 IGLV1-44P01699 117 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 PRB4P10163 310 aaPredicted RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 VDAC2P45880 294 aaPredicted RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 COL4A3Q01955 1670 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 COL8A2P25067 703 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 PPIFP30405 207 aaKnown RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 NUP35Q8NFH5 326 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 NXT2Q9NPJ8 142 aaKnown RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 YLPM1P49750 1951 aaKnown RBP12□□□□□ -0.49
PTPRU-205ENST00000460170 GTF3C1Q12789 2109 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 M0R1W7 72 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 IGFL3Q6UXB1 125 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 Q8TCH9 128 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 CFHR2P36980 270 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 C1orf194Q5T5A4 169 aa12□□□□□ -0.49
PTPRU-205ENST00000460170 A0A1W2PPI3 338 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 PAX8Q06710 450 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
PTPRU-205ENST00000460170 F2Z2F3 143 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 C15orf65H3BRN8 121 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 UBE2L6O14933 153 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
PTPRU-205ENST00000460170 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
PTPRU-205ENST00000460170 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 HAX1O00165 279 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 LINC00527Q9UJ94 153 aa11.99□□□□□ -0.49
PTPRU-205ENST00000460170 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 GEMIN7Q9H840 131 aaKnown RBP11.98□□□□□ -0.49
PTPRU-205ENST00000460170 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 GLMPQ8WWB7 406 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 TRAV8-1A0A0A6YYK1 113 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 Q6ZSR3 168 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 LINC00479Q96M42 142 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.98□□□□□ -0.492e-6■■■□□ 19.2
PTPRU-205ENST00000460170 TRAV41A0A0B4J266 112 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 CRXO43186 299 aaPredicted RBP11.98□□□□□ -0.49
PTPRU-205ENST00000460170 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 FBLN7Q53RD9 439 aa11.98□□□□□ -0.49
PTPRU-205ENST00000460170 LY6HO94772 140 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 CEACAM8P31997 349 aaPredicted RBP11.97□□□□□ -0.49
PTPRU-205ENST00000460170 ZNF329Q86UD4 541 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 NDUFA4L2Q9NRX3 87 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 MOB4Q9Y3A3 225 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
PTPRU-205ENST00000460170 LYPD1Q8N2G4 141 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 CACNG7P62955 275 aa11.97□□□□□ -0.49
PTPRU-205ENST00000460170 DUX4L9Q6RFH8 374 aaPredicted RBP11.97□□□□□ -0.49
PTPRU-205ENST00000460170 FAM181BA6NEQ2 426 aa11.96□□□□□ -0.49
PTPRU-205ENST00000460170 IFI27L1Q96BM0 104 aa11.96□□□□□ -0.49
PTPRU-205ENST00000460170 NPFFO15130 113 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms