RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 DEFB125Q8N687 156 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 OR1L8Q8NGR8 309 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 CACNG8Q8WXS5 425 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 GCM1Q9NP62 436 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 IDI2-AS1Q9NZ38 188 aa12.67□□□□□ -0.38
CMTM3-203ENST00000460097 TRAV34A0A0B4J273 112 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 IGHV3-64DA0A0J9YX35 117 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 INS-IGF2F8WCM5 200 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 SPINK4O60575 86 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 TOX4O94842 621 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 SLC25A16P16260 332 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 PRDX2P32119 198 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 RFESDQ8TAC1 157 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 PSMB11A5LHX3 300 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 OR7C2O60412 319 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 MGST1P10620 155 aaKnown RBP12.66□□□□□ -0.38
CMTM3-203ENST00000460097 GATA4P43694 442 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 MFAP2P55001 183 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 ZNF826PQ6ZT77 177 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 GCSAMQ8N6F7 178 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 FAM167A-AS1Q96KT0 104 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 BPESC1Q9GZL8 116 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 SERTAD4Q9NUC0 356 aa12.66□□□□□ -0.38
CMTM3-203ENST00000460097 VWC2LB2RUY7 222 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 CGB3P0DN86 165 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 CGB7P0DN87 165 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
CMTM3-203ENST00000460097 Q56UQ5 140 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 FAM120AOSQ5T036 256 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 MOGAT3Q86VF5 341 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 OR51B2Q9Y5P1 312 aa12.65□□□□□ -0.38
CMTM3-203ENST00000460097 TAX1BP3O14907 124 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 ACTL6BO94805 426 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 SLC35B1P78383 322 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 VAMP3Q15836 100 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 MAJINQ3KP22 176 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 C7orf69Q9H7B7 122 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 CD5LO43866 347 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 RPL39P5Q59GN2 51 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 BVES-AS1Q5T3Y7 98 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 NUDT10Q8NFP7 164 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 NUDT11Q96G61 164 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 TIMD4Q96H15 378 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
CMTM3-203ENST00000460097 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
CMTM3-203ENST00000460097 DYSFO75923 2080 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 FAM231BA6NCW3 169 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 OR4C46A6NHA9 309 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 SRRM5B3KS81 715 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 UPK2O00526 184 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 PEX7O00628 323 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 ZNF134P52741 427 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 CD69Q07108 199 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 SLC25A34Q6PIV7 304 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 ATOH7Q8N100 152 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 CIARTQ8N365 385 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-203ENST00000460097 OR1L4Q8NGR5 311 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 TMUB1Q9BVT8 246 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 SLC25A2Q9BXI2 301 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 KLF12Q9Y4X4 402 aa12.63□□□□□ -0.39
CMTM3-203ENST00000460097 IGKV1OR2-108A0A075B7D4 117 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 TMEM178BH3BS89 294 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 SYS1-DBNDD2H3BUS1 97 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 OCIAD2Q56VL3 154 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
CMTM3-203ENST00000460097 TPRX1Q8N7U7 411 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 URB1-AS1Q96HZ7 61 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 CST9LQ9H4G1 147 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 ZNF492Q9P255 531 aa12.62□□□□□ -0.39
CMTM3-203ENST00000460097 SMAD7O15105 426 aaKnown RBP12.61□□□□□ -0.39
CMTM3-203ENST00000460097 MYCNOSP40205 109 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 UBE2L3P68036 154 aaKnown RBP12.61□□□□□ -0.39
CMTM3-203ENST00000460097 HBBP68871 147 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
CMTM3-203ENST00000460097 FAM71F2Q6NXP2 309 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 ZNF329Q86UD4 541 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 LINC00574Q9H8X3 128 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 CALYQ9NYX4 217 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 A0A096LNT2 108 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 IGHV4-61A0A0C4DH41 118 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 RPL8P62917 257 aaKnown RBP12.61□□□□□ -0.39
CMTM3-203ENST00000460097 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 STXBP6Q8NFX7 210 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 LRRC29Q8WV35 223 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 NDFIP1Q9BT67 221 aa12.61□□□□□ -0.39
CMTM3-203ENST00000460097 ZNF355PQ9NSJ1 428 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms