RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C1orf194Q5T5A4 169 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
COL7A1-203ENST00000459756 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 SMIM8Q96KF7 97 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 RARRES2Q99969 163 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 FBXL17Q9UF56 701 aa11.81□□□□□ -0.52
COL7A1-203ENST00000459756 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
COL7A1-203ENST00000459756 KNCNA6PVL3 124 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 SPP1P10451 314 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 AKR1C1Q04828 323 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 PSMG4Q5JS54 123 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 RYR2Q92736 4967 aa11.8□□□□□ -0.52
COL7A1-203ENST00000459756 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 S100A10P60903 97 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL7A1-203ENST00000459756 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 ACOT7LQ6ZUV0 252 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 PPP1R14BQ96C90 147 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 RAB40CQ96S21 281 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 SLC45A2Q9UMX9 530 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
COL7A1-203ENST00000459756 ALG5Q9Y673 324 aa11.79□□□□□ -0.52
COL7A1-203ENST00000459756 JTBO76095 146 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 MBPP02686 304 aaPredicted RBP11.78□□□□□ -0.52
COL7A1-203ENST00000459756 PAX9P55771 341 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 TAS2R30P59541 319 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 BPIFCQ8NFQ6 507 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 C2orf50Q96LR7 162 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 AGRNO00468 2067 aa11.78□□□□□ -0.52
COL7A1-203ENST00000459756 GIG44P09565 113 aaPredicted RBP11.77□□□□□ -0.53
COL7A1-203ENST00000459756 S100A7P31151 101 aa11.77□□□□□ -0.53
COL7A1-203ENST00000459756 TMEM14EPQ6UXP3 125 aa11.77□□□□□ -0.53
COL7A1-203ENST00000459756 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.53
COL7A1-203ENST00000459756 C11orf68Q9H3H3 251 aaKnown RBP11.77□□□□□ -0.53
COL7A1-203ENST00000459756 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.53
COL7A1-203ENST00000459756 SMCO3A2RU48 225 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 NUPR2A6NF83 97 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 L7N2F9 121 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 TSC22D2O75157 780 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 ID1P41134 155 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 VAMP2P63027 116 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 DLK1P80370 383 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 PMS2P11Q13670 270 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 SAMD13Q5VXD3 122 aa11.76□□□□□ -0.53
COL7A1-203ENST00000459756 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 K7EPK0 472 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 METTL15P1P0C7V9 234 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 C4BPBP20851 252 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 PSMB3P49720 205 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 BCAP31P51572 246 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 RAB32Q13637 225 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 LRRC37A5PQ49AS3 106 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 OR10P1Q8NGE3 313 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
COL7A1-203ENST00000459756 DNAH1Q9P2D7 4330 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 ZNF98A6NK75 572 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 H3BMM0 161 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 ORM2P19652 201 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 GATA2P23769 480 aaPredicted RBP11.74□□□□□ -0.53
COL7A1-203ENST00000459756 GALR1P47211 349 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 MEOX2P50222 304 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
COL7A1-203ENST00000459756 SELENOTP62341 195 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
COL7A1-203ENST00000459756 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
COL7A1-203ENST00000459756 CYP2G1PQ6ZSU1 146 aa11.74□□□□□ -0.53
COL7A1-203ENST00000459756 ISLRO14498 428 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 SOCS3O14543 225 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 CCNKO75909 580 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
COL7A1-203ENST00000459756 CAV2P51636 162 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 RRAS2P62070 204 aaPredicted RBP11.73□□□□□ -0.53
COL7A1-203ENST00000459756 OXA1LQ15070 435 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 OR1B1Q8NGR6 318 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 LINC00052Q96N35 136 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 GPR82Q96P67 336 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 C1QTNF4Q9BXJ3 329 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 MFFQ9GZY8 342 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 SLC25A32Q9H2D1 315 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 SLC25A22Q9H936 323 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 NPVFQ9HCQ7 196 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
COL7A1-203ENST00000459756 ZNF705EA8MWA4 302 aaPredicted RBP11.72□□□□□ -0.53
COL7A1-203ENST00000459756 MIFP14174 115 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 H2BFSP57053 126 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 Q8NAQ8 132 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 CSNK1G2-AS1Q8NCQ2 148 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 C11orf45Q8TAV5 145 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 MED28Q9H204 178 aa11.72□□□□□ -0.53
COL7A1-203ENST00000459756 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
COL7A1-203ENST00000459756 HYPMO75409 117 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 LINC00869P0C866 280 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms