RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 EFNB3Q15768 340 aa13.16□□□□□ -0.3
HDAC7-217ENST00000459625 GAGE2AQ6NT46 116 aa13.16□□□□□ -0.3
HDAC7-217ENST00000459625 ZNF319Q9P2F9 582 aa13.16□□□□□ -0.3
HDAC7-217ENST00000459625 DIDO1Q9BTC0 2240 aaKnown RBP13.16□□□□□ -0.3
HDAC7-217ENST00000459625 RGPD3A6NKT7 1758 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-217ENST00000459625 SPINK13Q1W4C9 94 aa13.16□□□□□ -0.3
HDAC7-217ENST00000459625 GSN-AS1Q9NRJ2 163 aa13.16□□□□□ -0.3
HDAC7-217ENST00000459625 RPL23P62829 140 aaKnown RBP13.16□□□□□ -0.3
HDAC7-217ENST00000459625 TRAV3A0A0B4J244 114 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 SH2D1AO60880 128 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
HDAC7-217ENST00000459625 GAGE6Q13070 117 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 A0A087WV48 116 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 F2Z2F3 143 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 DUTP33316 252 aaKnown RBP13.15□□□□□ -0.3
HDAC7-217ENST00000459625 UBE2BP63146 152 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 C5orf24Q7Z6I8 188 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 MTURNQ8N3F0 131 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 VWCEQ96DN2 955 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 TRBV6-7A0A0A0MS04 114 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 SLC25A16P16260 332 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 IFI27L1Q96BM0 104 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 IGKV1OR2-108A0A075B7D4 117 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 LINC01619G3V211 115 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 LCN12Q6JVE5 192 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 DEFB105AQ8NG35 78 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
HDAC7-217ENST00000459625 A8MWV9 139 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 GGTLC1Q9BX51 225 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 LINC00205P59089 165 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 THADAQ6YHU6 1953 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 ZDBF2Q9HCK1 2354 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 PI4KAP42356 2102 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 A0A0J9YY99 117 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 TNFSF13O75888 250 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 OCC1Q8TAD7 63 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 IGF2BP2-AS1Q96M15 143 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 ATAD5Q96QE3 1844 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 TMEM238C9JI98 176 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 PCP4P48539 62 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 CR1LQ2VPA4 569 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 NR2C2APQ86WQ0 139 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 TNFRSF6BO95407 300 aa13.14□□□□□ -0.31
HDAC7-217ENST00000459625 BUB1B-PAK6H3BSN5 160 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 ZNF138P52744 262 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 PMVKQ15126 192 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 TIMP3P35625 211 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 BMPERQ8N8U9 685 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 ARAP2Q8WZ64 1704 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 WISP3O95389 354 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-217ENST00000459625 CD177Q8N6Q3 437 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 MSMBP08118 114 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 CCL20P78556 96 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 TMEM256Q8N2U0 113 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 C18orf12Q96KH6 178 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 ZNRD1Q9P1U0 126 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 H3BMM0 161 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 AZU1P20160 251 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 NABP1Q96AH0 204 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 UBE2WQ96B02 151 aa13.13□□□□□ -0.31
HDAC7-217ENST00000459625 TRAV8-1A0A0A6YYK1 113 aa13.12□□□□□ -0.31
HDAC7-217ENST00000459625 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
HDAC7-217ENST00000459625 IGKV1-5P01602 117 aa13.12□□□□□ -0.31
HDAC7-217ENST00000459625 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
HDAC7-217ENST00000459625 COL11A1P12107 1806 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-217ENST00000459625 TAL2Q16559 108 aa13.12□□□□□ -0.31
HDAC7-217ENST00000459625 IGKV2D-24A0A075B6R9 120 aa13.12□□□□□ -0.31
HDAC7-217ENST00000459625 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 ZFP36L1Q07352 338 aaKnown RBP13.11□□□□□ -0.31
HDAC7-217ENST00000459625 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 MINOS1Q5TGZ0 78 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 MINOS1-NBL1R4GNA1 71 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 EIF4EBP2Q13542 120 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-217ENST00000459625 HAPLN4Q86UW8 402 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 ZNF479Q96JC4 524 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
HDAC7-217ENST00000459625 KLF5Q13887 457 aaPredicted RBP13.11□□□□□ -0.31
HDAC7-217ENST00000459625 ABCA4P78363 2273 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 APOC4P55056 127 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 VWC2Q2TAL6 325 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 EFNA2O43921 213 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 SAMD5Q5TGI4 173 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 TIMM21Q9BVV7 248 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
HDAC7-217ENST00000459625 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 LINC00587B1AMM8 73 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 PRB2P02812 416 aaPredicted RBP13.09□□□□□ -0.31
HDAC7-217ENST00000459625 YLPM1P49750 1951 aaKnown RBP13.09□□□□□ -0.31
HDAC7-217ENST00000459625 VCYO14598 125 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 hADV29S1A0JD25 119 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 USMG5Q96IX5 58 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 FANCMQ8IYD8 2048 aa13.09□□□□□ -0.31
HDAC7-217ENST00000459625 ANKRD36A6QL64 1941 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms