RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 SS18L1O75177 396 aaPredicted RBP8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 PPIAL4GP0DN37 164 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CCL3L1P16619 93 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 C19orf54Q5BKX5 351 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CLEC7AQ9BXN2 247 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 A0A0G2JNJ9 132 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 WISP1O95388 367 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 PFN1P07737 140 aaKnown RBP8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CECR9P0C854 216 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CCL1P22362 96 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 NPPCP23582 126 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 SEC11AP67812 179 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 PSG9Q00887 426 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 ZCCHC24Q8N2G6 241 aaKnown RBP8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 STPG4Q8N801 248 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 DEFB104AQ8WTQ1 72 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 Q9UFV3 132 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 ABCA2Q9BZC7 2435 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 A0A1B0GW64 132 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 FOXH1O75593 365 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 DNAL4O96015 105 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 HBDP02042 147 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 EVI2AP22794 236 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 OR10W1Q8NGF6 305 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 OR4X2Q8NGF9 303 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 OR13C6PQ8NH95 151 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 IGHV1-2P23083 117 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 SUMO2P61956 95 aaKnown RBP8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 ACTL10Q5JWF8 245 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 FAM168AQ92567 244 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 CYYR1Q96J86 154 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 LINC00479Q96M42 142 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 YAE1D1Q9NRH1 226 aa8.05□□□□□ -1.12
MSC-AS1-201ENST00000457356 DENND4CQ5VZ89 1909 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 TRAV30A0A087WSZ9 112 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 TRAV12-3A0A0B4J271 114 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 FAM181BA6NEQ2 426 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 ITGB1BP1O14713 200 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 SRSF4Q08170 494 aaKnown RBP8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 C10orf55Q5SWW7 151 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 EBLN2Q6P2I7 272 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 MRPL20Q9BYC9 149 aaKnown RBP8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 HIVEP2P31629 2446 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 NPIPB5A8MRT5 1133 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 NPIPB11E5RHQ5 1161 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 PPP1R17O96001 155 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 OR5A1Q8NGJ0 315 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 TSKUQ8WUA8 353 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 PLXND1Q9Y4D7 1925 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 KBTBD11-OT1A0A1B0GTJ5 212 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 IL18BPO95998 194 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 CD24P25063 80 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 DUTP33316 252 aaKnown RBP8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 GLRXP35754 106 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 ID1P41134 155 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 PLAURQ03405 335 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 FAM159AQ6UWV7 190 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 GTSCR1Q86UQ5 136 aa8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 CIARTQ8N365 385 aaPredicted RBP8.04□□□□□ -1.12
MSC-AS1-201ENST00000457356 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 CD69Q07108 199 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 MORN2Q502X0 79 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 FAM71F2Q6NXP2 309 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 DDB2Q92466 427 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 TRAV8-1A0A0A6YYK1 113 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 HOXA3O43365 443 aaPredicted RBP8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 PSPNO60542 156 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 NCR2O95944 276 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 FAM106CPP0CH98 169 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 COX11Q9Y6N1 276 aa8.03□□□□□ -1.12
MSC-AS1-201ENST00000457356 SAA2-SAA4A0A096LPE2 208 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 UPK2O00526 184 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 IGHV4-39P01824 125 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 IGHG3P01860 377 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 SAA2P0DJI9 122 aaPredicted RBP8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 PRTN3P24158 256 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 QRFPP83859 136 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 HSD52Q0P140 79 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 MLANAQ16655 118 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 TMEM14EPQ6UXP3 125 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 C1orf162Q8NEQ5 155 aaPredicted RBP8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 RNASEH2CQ8TDP1 164 aaKnown RBP8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 FMC1Q96HJ9 113 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 PSG8Q9UQ74 426 aa8.02□□□□□ -1.12
MSC-AS1-201ENST00000457356 LRRK2Q5S007 2527 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 CD300EQ496F6 205 aaPredicted RBP8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 CST9LQ9H4G1 147 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 DKK4Q9UBT3 224 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 IGHV1-69-2A0A0G2JMI3 117 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 FABP5P3A8MUU1 101 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 NTF4P34130 210 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 ZNF497Q6ZNH5 498 aa8.02□□□□□ -1.13
MSC-AS1-201ENST00000457356 IGLV3-32A0A0A0MS00 114 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms