RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 WISP2O76076 250 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 RUSC1-AS1Q66K80 236 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 YAE1D1Q9NRH1 226 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 DTX1Q86Y01 620 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 FGF23Q9GZV9 251 aaPredicted RBP6.29□□□□□ -1.4
RIF1-206ENST00000453091 KLF2Q9Y5W3 355 aaPredicted RBP6.29□□□□□ -1.4
RIF1-206ENST00000453091 K7EN84 100 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 MMP23AO75900 390 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 UBE2V1Q13404 147 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 CHCHD1Q96BP2 118 aaKnown RBP6.29□□□□□ -1.4
RIF1-206ENST00000453091 LINC01587Q99440 93 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 MRPS18CQ9Y3D5 142 aaKnown RBP6.29□□□□□ -1.4
RIF1-206ENST00000453091 KNL1Q8NG31 2342 aa6.29□□□□□ -1.4
RIF1-206ENST00000453091 FRMD6-AS1P0C7T7 363 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 TDGF1P13385 188 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 NSUN5P1Q3KNT7 163 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ZNF672Q499Z4 452 aaPredicted RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 SPRNQ5BIV9 151 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ST20Q9HBF5 79 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 DOCK4Q8N1I0 1966 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 OR4X2Q8NGF9 303 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 SLC25A15Q9Y619 301 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 A0A087WWL8 130 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 GGTLC3B5MD39 225 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ZNF134P52741 427 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 PSG3Q16557 428 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 VMO1Q7Z5L0 202 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 Q86TA4 180 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 C14orf178Q8N769 122 aaPredicted RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 THBDP07204 575 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 ZNF883P0CG24 379 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 HSD52Q0P140 79 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 RNASE6Q93091 150 aaKnown RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 SLC25A2Q9BXI2 301 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 PSME4Q14997 1843 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 TRPM6Q9BX84 2022 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 WNK3Q9BYP7 1800 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 MYO9BQ13459 2157 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 IGLL1P15814 213 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 WT1P19544 449 aaPredicted RBP6.28□□□□□ -1.4
RIF1-206ENST00000453091 TMEM155Q4W5P6 130 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 MDS2Q8NDY4 140 aa6.28□□□□□ -1.4
RIF1-206ENST00000453091 TDRG1Q3Y452 100 aa6.27□□□□□ -1.4
RIF1-206ENST00000453091 SIGMAR1Q99720 223 aa6.27□□□□□ -1.4
RIF1-206ENST00000453091 CKS1BP61024 79 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 PVRIGQ6DKI7 326 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 SRSF1Q07955 248 aaKnown RBP eCLIP6.27□□□□□ -1.411e-6■■■■□ 20.6
RIF1-206ENST00000453091 ZC2HC1BQ5TFG8 222 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 ANAPC13Q9BS18 74 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 K7ERJ3 54 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 SRSF7Q16629 238 aaKnown RBP eCLIP6.27□□□□□ -1.41
RIF1-206ENST00000453091 V9GYV3 84 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 POLR2AP24928 1970 aaKnown RBP6.27□□□□□ -1.41
RIF1-206ENST00000453091 PSMG4Q5JS54 123 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 LURAP1LQ8IV03 231 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 CD28P10747 220 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 C17orf77Q96MU5 243 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 CKAP5Q14008 2032 aa6.27□□□□□ -1.41
RIF1-206ENST00000453091 IGLC2P0DOY2 106 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 IGLC3P0DOY3 106 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 IL15RAQ13261 267 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 LINC00173Q6ZV60 143 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 TMEM167AQ8TBQ9 72 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 SNRPD3P62318 126 aaKnown RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 GAGE13Q4V321 117 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 ATP5IP56385 69 aaPredicted RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 PAX2Q02962 417 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 C15orf32Q32M92 178 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 A0A1W2PPI3 338 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 CHAC1Q9BUX1 264 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 PGPEP1Q9NXJ5 209 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 PCM1Q15154 2024 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 FRMPD3Q5JV73 1810 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 PHLDA1Q8WV24 401 aaPredicted RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 PLSCR4Q9NRQ2 329 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 TDRD15B5MCY1 1934 aaKnown RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 ZSWIM8A7E2V4 1837 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 KNCNA6PVL3 124 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 TMEM178BH3BS89 294 aa6.26□□□□□ -1.41
RIF1-206ENST00000453091 SRSF8Q9BRL6 282 aaKnown RBP6.26□□□□□ -1.41
RIF1-206ENST00000453091 HLA-DMBP28068 263 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 TMEM30BQ3MIR4 351 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 TMEM75Q8N9X5 138 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 CASP8AP2Q9UKL3 1982 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 A0A1B0GWJ7 208 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 IL17RELQ6ZVW7 336 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 BRWD1Q9NSI6 2320 aa6.25□□□□□ -1.41
RIF1-206ENST00000453091 GAGE12BA1L429 117 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms