RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 FBXL15Q9H469 300 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 NCOA6Q14686 2063 aaPredicted RBP6.75□□□□□ -1.33
SMCO1-202ENST00000452776 A0A096LNJ9 63 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 IGHV3-15A0A0B4J1V0 119 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 MYMXA0A1B0GTQ4 84 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 FAM90A27PA6NNH2 459 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 IGHG3P01860 377 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 FCER1GP30273 86 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 PRCDQ00LT1 54 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 CD69Q07108 199 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 LINC00696Q6ZRV3 163 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 YRDCQ86U90 279 aaKnown RBP6.74□□□□□ -1.33
SMCO1-202ENST00000452776 PLXDC1Q8IUK5 500 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 RASL11BQ9BPW5 248 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 DEFB126Q9BYW3 111 aa6.74□□□□□ -1.33
SMCO1-202ENST00000452776 A0A0J9YW62 118 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 A0A1W2PQF6 199 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 INS-IGF2F8WCM5 200 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 PRSS1P07477 247 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 LIFP15018 202 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 ACP1P24666 158 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 ZNF157P51786 506 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-202ENST00000452776 PAX8Q06710 450 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 ADIPOQQ15848 244 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 TBC1D28Q2M2D7 210 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 TMEM196Q5HYL7 178 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 TMEM78Q5T7P6 136 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 FAM104BQ5XKR9 115 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 ITLN1Q8WWA0 313 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 NXT2Q9NPJ8 142 aaKnown RBP6.73□□□□□ -1.33
SMCO1-202ENST00000452776 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 GTF3C1Q12789 2109 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 NPYP01303 97 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 TCRAP04437 139 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 CELA2AP08217 269 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 CD24P25063 80 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 PLNP26678 52 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 PSMB2P49721 201 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 ERHP84090 104 aaKnown RBP6.73□□□□□ -1.33
SMCO1-202ENST00000452776 LRRC75A-AS1Q8N1F1 130 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 RBMXL3Q8N7X1 1067 aaKnown RBP6.73□□□□□ -1.33
SMCO1-202ENST00000452776 CARD19Q96LW7 228 aa6.73□□□□□ -1.33
SMCO1-202ENST00000452776 CHCHD2Q9Y6H1 151 aaPredicted RBP6.73□□□□□ -1.33
SMCO1-202ENST00000452776 TRAV25A0A0B4J276 109 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 CFHR2P36980 270 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 SMCPP49901 116 aaPredicted RBP6.72□□□□□ -1.33
SMCO1-202ENST00000452776 GFERP55789 205 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 OTORQ9NRC9 128 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 SPAG17Q6Q759 2223 aa6.72□□□□□ -1.33
SMCO1-202ENST00000452776 TRBV7-3A0A075B6L6 115 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 IGHV3-20A0A0C4DH32 117 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 WI2-2373I1.2A0A1W2PRP0 233 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 KLK10O43240 276 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 RBP4P02753 201 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 FAM106CPP0CH98 169 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 PRTN3P24158 256 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 CD27P26842 260 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 ID1P41134 155 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 UBE2D3P61077 147 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 UBE2D2P62837 147 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.33
SMCO1-202ENST00000452776 C1orf61Q13536 156 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 FAM106AQ4KMX7 169 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 C17orf82Q86X59 251 aaPredicted RBP6.71□□□□□ -1.33
SMCO1-202ENST00000452776 SLC22A18ASQ8N1D0 253 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 CIARTQ8N365 385 aaPredicted RBP6.71□□□□□ -1.33
SMCO1-202ENST00000452776 UBALD1Q8TB05 177 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 SRSF12Q8WXF0 261 aaKnown RBP6.71□□□□□ -1.33
SMCO1-202ENST00000452776 PLPPR2Q96GM1 343 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 LINC01600Q96MT4 127 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.33
SMCO1-202ENST00000452776 SIGLEC9Q9Y336 463 aa6.71□□□□□ -1.33
SMCO1-202ENST00000452776 NCKAP5O14513 1909 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 LOC389332A0A1B0GUA5 103 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 D6R8Y8 96 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 PRRG2O14669 202 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 MRPL33O75394 65 aaKnown RBP6.71□□□□□ -1.34
SMCO1-202ENST00000452776 AVPP01185 164 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 CKS2P33552 79 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 CCL11P51671 97 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 DEFB103AP81534 67 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 HES1Q14469 280 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 ZC2HC1BQ5TFG8 222 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 LINC00322Q6ZN03 302 aaPredicted RBP6.71□□□□□ -1.34
SMCO1-202ENST00000452776 THAP8Q8NA92 274 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 OR11H6Q8NGC7 330 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 OR4C13Q8NGP0 309 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 MYOZ3Q8TDC0 251 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 GLMPQ8WWB7 406 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 SRXN1Q9BYN0 137 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 PRRG4Q9BZD6 226 aa6.71□□□□□ -1.34
SMCO1-202ENST00000452776 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
SMCO1-202ENST00000452776 NOTCH4Q99466 2003 aa6.7□□□□□ -1.34
SMCO1-202ENST00000452776 MED12LQ86YW9 2145 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms