RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LYZL4Q96KX0 146 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 TMEM160Q9NX00 188 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 A6NDN8 102 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 ARPC5O15511 151 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 HOXB4P17483 251 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 GCSHP23434 173 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 PRSS8Q16651 343 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 OR2G3Q8NGZ4 309 aa4.53□□□□□ -1.68
CDC42BPA-209ENST00000448940 A0A096LPF7 62 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 C5orf63A6NC05 138 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ATP6V0E1O15342 81 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FOXE3Q13461 319 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 C5orf47Q569G3 176 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM162BQ5T6X4 162 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FGFRL1Q8N441 504 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 C15orf54Q8N8G6 183 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF502Q8TBZ5 544 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ZNF106Q9H2Y7 1883 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ATP5LO75964 103 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 PSG1P11464 419 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 PSMB3P49720 205 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 KRTDAPP60985 99 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 UBE2BP63146 152 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 CADM3Q8N126 398 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 GAB2Q9UQC2 676 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 MFNGO00587 321 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 PTHLHP12272 177 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ANXA2RQ3ZCQ2 193 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FA2HQ7L5A8 372 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 TRBV5-7A0A0A0MS05 114 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 LOC389332A0A1B0GUA5 103 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 DUXBA0A1W2PPF3 345 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM24AA6NFZ4 105 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FCN3O75636 299 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 LINC00869P0C866 280 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 PAX5Q02548 391 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 TFF3Q07654 80 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 MRPL30Q8TCC3 161 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 NPIPB3Q92617 1050 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 DAZ1Q9NQZ3 744 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM212BQ9NTI7 297 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 CTSZQ9UBR2 303 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 RCL1Q9Y2P8 373 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 V9GYY9 64 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 PRR32B1ATL7 298 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 TCRBP04435 133 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 ODF3L1Q8IXM7 274 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM14DPA8MWL7 114 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 G3V4G9 280 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 COX6CP09669 75 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 NDPQ00604 133 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 VWC2Q2TAL6 325 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 KCNS1Q96KK3 526 aa4.52□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMSB15BA0A087X1C1 80 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM189A5PLL7 270 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAM78BQ5VT40 261 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 FAAP20Q6NZ36 180 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 SDF2L1Q9HCN8 221 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GGTLC3B5MD39 225 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 CCSO14618 274 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 RBFOX2O43251 390 aaKnown RBP eCLIP4.51□□□□□ -1.699e-6■■□□□ 11.7
CDC42BPA-209ENST00000448940 SNRPEP62304 92 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GTSF1Q8WW33 167 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 FANCD2OSQ96PS1 177 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 NABP2Q9BQ15 211 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 RSPO3Q9BXY4 272 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 TEP1Q99973 2627 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PGLYRP1O75594 196 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 AMBPP02760 352 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 IGFBP2P18065 325 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GUSBP1Q15486 140 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 CCBE1Q6UXH8 406 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 DPPA3Q6W0C5 159 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 SIGLEC15Q6ZMC9 328 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PRNTQ86SH4 94 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 NKX6-2Q9C056 277 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 HRH4Q9H3N8 390 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PGPEP1Q9NXJ5 209 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PAX4O43316 350 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 BLCAPP62952 87 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PMVKQ15126 192 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 TMEM42Q69YG0 159 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 SIGIRRQ6IA17 410 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 Q6YL49 198 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 LDLRAD3Q86YD5 345 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 SPXQ9BT56 116 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 KIAA1549LQ6ZVL6 1849 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 A8MXK9 166 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 IER3P46695 156 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PSG9Q00887 426 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 NHLRC3Q5JS37 347 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 NRG4Q8WWG1 115 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 GALNT14Q96FL9 552 aa4.51□□□□□ -1.69
CDC42BPA-209ENST00000448940 PNRC2Q9NPJ4 139 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms