RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 VPS13DQ5THJ4 4388 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 H3BMM0 161 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 HLA-DRB4P13762 266 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 C4BPBP20851 252 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 S100A7P31151 101 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 ID3Q02535 119 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 ZNF90Q03938 601 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 SPATA31B1PQ5VZV4 182 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 HLA-DRB4X5D2U9 266 aa8.19□□□□□ -1.1
CDCA3-203ENST00000446553 IGKV1OR2-108A0A075B7D4 117 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 C9orf170A2RU37 121 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 LY6G6CO95867 125 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 H2AFB2P0C5Z0 115 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 IAPPP10997 89 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 ID1P41134 155 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 PSMB3P49720 205 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 MEOX2P50222 304 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 NANOS2P60321 138 aaKnown RBP8.18□□□□□ -1.1
CDCA3-203ENST00000446553 OR4D5Q8NGN0 318 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 NEU1Q99519 415 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 PBDC1Q9BVG4 233 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 C20orf85Q9H1P6 137 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 X6R8D5 127 aa8.18□□□□□ -1.1
CDCA3-203ENST00000446553 IGHV4-28A0A0C4DH34 117 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 ISLRO14498 428 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 SOCS3O14543 225 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 PRAF2O60831 178 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 HOXB5P09067 269 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
CDCA3-203ENST00000446553 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 LYZP61626 148 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
CDCA3-203ENST00000446553 FOXI2Q6ZQN5 318 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 COQ8AQ8NI60 647 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 C2CD4CQ8TF44 421 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 GPR82Q96P67 336 aa8.17□□□□□ -1.1
CDCA3-203ENST00000446553 STRAPQ9Y3F4 350 aaKnown RBP8.17□□□□□ -1.1
CDCA3-203ENST00000446553 TRAV6A0A075B6T7 132 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 WRBO00258 174 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 IFNA21P01568 189 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 IL5P05113 134 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 OR4E1P0C645 316 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 PAX9P55771 341 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 ZNF705AQ6ZN79 300 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-203ENST00000446553 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 OR8I2Q8N0Y5 310 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 BPIFCQ8NFQ6 507 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 SAV1Q9H4B6 383 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-203ENST00000446553 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
CDCA3-203ENST00000446553 DNAH10Q8IVF4 4471 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 FRAS1Q86XX4 4008 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 SMIM9A6NGZ8 99 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 DEFB4AO15263 64 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 GALR1P47211 349 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 TAS2R30P59541 319 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 SELENOTP62341 195 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 SPANXN5Q5MJ07 72 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 SMIM8Q96KF7 97 aa8.15□□□□□ -1.1
CDCA3-203ENST00000446553 GPN1Q9HCN4 374 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-203ENST00000446553 PAIP2BQ9ULR5 123 aaKnown RBP8.15□□□□□ -1.1
CDCA3-203ENST00000446553 TRAV10A0A0B4J240 114 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 TMEM189A5PLL7 270 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ZNF98A6NK75 572 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 A8MTW9 85 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ZNF705FA8MVS1 300 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-203ENST00000446553 K7EPK0 472 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ADAP1O75689 374 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ZNF705DP0CH99 300 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ZNF705BP0CI00 300 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ANXA7P20073 488 aaKnown RBP8.14□□□□□ -1.11
CDCA3-203ENST00000446553 PLP1P60201 277 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 OR2F1Q13607 317 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ACOT7LQ6ZUV0 252 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 S100A7AQ86SG5 101 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 MITD1Q8WV92 249 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 PPP1R14BQ96C90 147 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
CDCA3-203ENST00000446553 ELOA3CA0A087WX78 387 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-203ENST00000446553 A0A0J9YX75 114 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 C7orf66A4D0T2 115 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 PMS2P5A8MQ11 134 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 TSC22D2O75157 780 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 HLA-DMBP28068 263 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 POLR2GP62487 172 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDCA3-203ENST00000446553 DLK1P80370 383 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 C4orf46Q504U0 113 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 TMEM14EPQ6UXP3 125 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 RNF126Q9BV68 326 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 RPRMQ9NS64 109 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 PSENENQ9NZ42 101 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 XCL2Q9UBD3 114 aa8.13□□□□□ -1.11
CDCA3-203ENST00000446553 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms