RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CMTM2Q8TAZ6 248 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 SFRP2Q96HF1 295 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 OR4C12Q96R67 309 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 ZNF586Q9NXT0 402 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 SIGLEC9Q9Y336 463 aa6.46□□□□□ -1.38
CCDC39-201ENST00000442201 PRH1P02810 166 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM249Q2WGJ8 235 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 DEFB125Q8N687 156 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 ZNF709Q8N972 641 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 VN1R17PQ8TDU5 208 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM37Q8WXS4 190 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 SH3BGRL3Q9H299 93 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TPSG1Q9NRR2 321 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 APCP25054 2843 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 IGHV3OR16-10A0A075B7F0 116 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 LOC102724200A0A096LPH7 203 aaPredicted RBP6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TGFAP01135 160 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 CD24P25063 80 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 SRP14P37108 136 aaKnown RBP6.45□□□□□ -1.38
CCDC39-201ENST00000442201 SUMO1P63165 101 aaKnown RBP6.45□□□□□ -1.38
CCDC39-201ENST00000442201 PLGLAQ15195 96 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM41BQ5BJD5 291 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 PPP1R27Q86WC6 154 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 OR10P1Q8NGE3 313 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 FAM213BQ8TBF2 198 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 ATP5SQ99766 215 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 FBXL15Q9H469 300 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 PXMP4Q9Y6I8 212 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
CCDC39-201ENST00000442201 C15orf62A8K5M9 175 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 J3QLI3 93 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 RRHO14718 337 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 CRYGBP07316 175 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 SLC38A11Q08AI6 406 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 ARL16Q0P5N6 197 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM182Q6ZP80 229 aaPredicted RBP6.45□□□□□ -1.38
CCDC39-201ENST00000442201 HAPLN4Q86UW8 402 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 P2RX4Q99571 388 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 SIGMAR1Q99720 223 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 NDUFA4L2Q9NRX3 87 aa6.45□□□□□ -1.38
CCDC39-201ENST00000442201 NBR2O15453 112 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 IFNA5P01569 189 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 FAM106CPP0CH98 169 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 NPY1RP25929 384 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 RAB31Q13636 194 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 EBI3Q14213 229 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 C10orf55Q5SWW7 151 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 RUSC1-AS1Q66K80 236 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 C16orf82Q7Z2V1 217 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 KRTAP1-3Q8IUG1 177 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 OR1B1Q8NGR6 318 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 AJUBAQ96IF1 538 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 PEF1Q9UBV8 284 aaKnown RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 ABCA2Q9BZC7 2435 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 MAP1AP78559 2803 aaPredicted RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 REG1AP05451 166 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 YPEL3P61236 119 aaPredicted RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 TNXAQ16473 311 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 AMMECR1LQ6DCA0 310 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 BRD3OSQ6XYD6 125 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 NPBQ8NG41 125 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 RSG1Q9BU20 258 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 FASNP49327 2511 aaKnown RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 PMS2P5A8MQ11 134 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 NDUFA3O95167 84 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 IGHV4-31P0DP07 118 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 IGHV4-38-2P0DP08 117 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 RPL27AP46776 148 aaKnown RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 GALR1P47211 349 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 ATP5IP56385 69 aaPredicted RBP6.44□□□□□ -1.38
CCDC39-201ENST00000442201 MRGPRG-AS1Q2M3A8 158 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 MRAP2Q96G30 205 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 BTF3L4Q96K17 158 aa6.44□□□□□ -1.38
CCDC39-201ENST00000442201 TRBV7-9A0A0J9YWB2 115 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 INS-IGF2F8WCM5 200 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 HBE1P02100 147 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 CD99P14209 185 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 GNB1P62873 340 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 Q8N6K4 173 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 SCGB1C1Q8TD33 95 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 HSPB9Q9BQS6 159 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 TMEM147Q9BVK8 224 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 MANBALQ9NQG1 85 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 C1RLQ9NZP8 487 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 UNC79Q9P2D8 2635 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 OR2T8A6NH00 312 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 NCBP2LA6PVI3 153 aaKnown RBP6.43□□□□□ -1.38
CCDC39-201ENST00000442201 E7EUB6 86 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 CA2P00918 260 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 AVPP01185 164 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 CD33P20138 364 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 HERV-K104P63124 156 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 PSG9Q00887 426 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 CYP2G1PQ6ZSU1 146 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 OR5AU1Q8NGC0 362 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
CCDC39-201ENST00000442201 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms