RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PRNTQ86SH4 94 aa6.12□□□□□ -1.43
HDAC9-214ENST00000441542 KMT2EQ8IZD2 1858 aa6.12□□□□□ -1.43
HDAC9-214ENST00000441542 RNF138Q8WVD3 245 aa6.12□□□□□ -1.43
HDAC9-214ENST00000441542 H3BRM9 83 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 NXPH1P58417 271 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PRR20EP86478 221 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PRR20CP86479 221 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PRR20DP86480 221 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PRR20BP86481 221 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PRR20AP86496 221 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 KLF5Q13887 457 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 C10orf55Q5SWW7 151 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 SLC35E4Q6ICL7 350 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 SLC25A33Q9BSK2 321 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 CACNA1GO43497 2377 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 NAV3Q8IVL0 2385 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 IGLV3-12A0A075B6K2 115 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 SMKR1H3BMG3 65 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 TIMM8AO60220 97 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 IFI27P40305 119 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 HSPE1P61604 102 aaKnown RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PLGLB1Q02325 96 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 NRN1LQ496H8 165 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 BCL6BQ8N143 479 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 SMRP1Q8NCR6 262 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 OR2Z1Q8NG97 314 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 RPP21Q9H633 154 aaKnown RBP6.11□□□□□ -1.43
HDAC9-214ENST00000441542 TANC2Q9HCD6 1990 aa6.11□□□□□ -1.43
HDAC9-214ENST00000441542 IGHV1-45A0A0A0MS14 117 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 IGHV5-10-1A0A0J9YXX1 117 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 PRSS46E5RG02 174 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 H3BMG7 143 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 NKX2-8O15522 239 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 SP1P08047 785 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 CFHR2P36980 270 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 FXYD2P54710 66 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 C10orf113Q5VZT2 155 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 SRSF12Q8WXF0 261 aaKnown RBP6.1□□□□□ -1.43
HDAC9-214ENST00000441542 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 LAMTOR5O43504 91 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 COX6A1P12074 109 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 NEGR1Q7Z3B1 354 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 ZNF329Q86UD4 541 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 DUX5Q96PT3 197 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 SLC25A2Q9BXI2 301 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 COL4A2P08572 1712 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 M0QXV9 152 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 ARMS2P0C7Q2 107 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 SMIM13P0DJ93 91 aa6.1□□□□□ -1.43
HDAC9-214ENST00000441542 C17orf82Q86X59 251 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-214ENST00000441542 KBTBD11-OT1A0A1B0GTJ5 212 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 OR11H12B2RN74 326 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 C2CD4DB7Z1M9 353 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 OR2J3O76001 311 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 TSPAN13O95857 204 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 GATA3P23771 443 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 CSN1S1P47710 185 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 TBC1D28Q2M2D7 210 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
HDAC9-214ENST00000441542 PPP1R32Q7Z5V6 425 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 ZADH2Q8N4Q0 377 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 OR11H1Q8NG94 326 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 OR11H2Q8NH07 326 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 DEFB127Q9H1M4 99 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 MS4A6AQ9H2W1 248 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 DKK2Q9UBU2 259 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 SLC25A10Q9UBX3 287 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-214ENST00000441542 C15orf61A6NNL5 157 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 LTAP01374 205 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 IGKV1-16P04430 117 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 EIF4EBP1Q13541 118 aaPredicted RBP6.09□□□□□ -1.43
HDAC9-214ENST00000441542 HCP5Q6MZN7 132 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 GOLT1AQ6ZVE7 132 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 LINC00305Q7Z4B0 112 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 Q8IYB0 196 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 OR1L4Q8NGR5 311 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 CHCHD1Q96BP2 118 aaKnown RBP6.09□□□□□ -1.43
HDAC9-214ENST00000441542 ZNF747Q9BV97 191 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 CHRNA10Q9GZZ6 450 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 INSIG2Q9Y5U4 225 aa6.09□□□□□ -1.43
HDAC9-214ENST00000441542 TET2Q6N021 2002 aaPredicted RBP6.09□□□□□ -1.44
HDAC9-214ENST00000441542 DSCAML1Q8TD84 2053 aa6.09□□□□□ -1.44
HDAC9-214ENST00000441542 PSMB11A5LHX3 300 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 MGST3O14880 152 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 FAM87AP0C7U9 286 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 ZNF146Q15072 292 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 FAM162BQ5T6X4 162 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 DKK4Q9UBT3 224 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 TECTAO75443 2155 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 A0A1B0GWB2 263 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 FNDC10F2Z333 226 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 FTH1P19P0C7X4 201 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 SP9P0CG40 484 aa6.08□□□□□ -1.44
HDAC9-214ENST00000441542 FOLR3P41439 243 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms