RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 S4R3C0 116 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 HSPG2P98160 4391 aa3.63□□□□□ -1.83
PTPN4-206ENST00000441089 IGKV1D-37A0A075B6S9 117 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 IGKV1OR2-108A0A075B7D4 117 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 TRBV9A0A0B4J1U6 114 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 UBE2L5PA0A1B0GUS4 154 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 KANTRA0A1W2PQU2 76 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 AP4M1O00189 453 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 TAAR5O14804 337 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 OR2J3O76001 311 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 MT-CO2P00403 227 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 ATP5IP56385 69 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 RAB11AP62491 216 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 RUNX1Q01196 453 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 KIAA0141Q14154 515 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 GAMTQ14353 236 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 AKIRIN2Q53H80 203 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 SLC25A24Q6NUK1 477 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM182Q6ZP80 229 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 SLC51BQ86UW2 128 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 STX12Q86Y82 276 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 HSD17B11Q8NBQ5 300 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 RNASEH2CQ8TDP1 164 aaKnown RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 PINX1Q96BK5 328 aaKnown RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM68Q96MH6 324 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 MGST2Q99735 147 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 GINS3Q9BRX5 216 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 RSG1Q9BU20 258 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF471Q9BX82 626 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 PARD6GQ9BYG4 376 aaPredicted RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 WDR61Q9GZS3 305 aaKnown RBP3.62□□□□□ -1.83
PTPN4-206ENST00000441089 SH3BGRL3Q9H299 93 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF580Q9UK33 172 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 WDR83OSQ9Y284 106 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 DNAH6Q9C0G6 4158 aa3.62□□□□□ -1.83
PTPN4-206ENST00000441089 BORCS7-ASMTA0A0B4J1R7 106 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 SMCO3A2RU48 225 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 CCL24O00175 119 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 DFFBO76075 338 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 IGHV3-23P01764 117 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 SPP1P10451 314 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 DEFA4P12838 97 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 MALP21145 153 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 FGF7P21781 194 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 ATP6V0CP27449 155 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
PTPN4-206ENST00000441089 OPRK1P41145 380 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 RND2P52198 227 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 SUB1P53999 127 aaKnown RBP eCLIP3.61□□□□□ -1.83
PTPN4-206ENST00000441089 HBG1P69891 147 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 HBG2P69892 147 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 RHOGP84095 191 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 EXOSC2Q13868 293 aaKnown RBP3.61□□□□□ -1.83
PTPN4-206ENST00000441089 RBMY1FQ15415 496 aaKnown RBP3.61□□□□□ -1.83
PTPN4-206ENST00000441089 ATP6V1FQ16864 119 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 FAM74A1Q5RGS3 127 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 TEX261Q6UWH6 196 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 BTNL8Q6UX41 500 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 ALKAL2Q6UX46 152 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 TMEM144Q7Z5S9 345 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 ZNF329Q86UD4 541 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 BAP18Q8IXM2 172 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 UBAC2Q8NBM4 344 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 CACNG8Q8WXS5 425 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 MS4A10Q96PG2 267 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 GGACTQ9BVM4 153 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 GGTLC1Q9BX51 225 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 GON7Q9BXV9 100 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 SLA2Q9H6Q3 261 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 VSIRQ9H7M9 311 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 UQCC1Q9NVA1 299 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 SLC45A2Q9UMX9 530 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
PTPN4-206ENST00000441089 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
PTPN4-206ENST00000441089 VPS13DQ5THJ4 4388 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 RPS10-NUDT3A0A1W2PQS6 291 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 NUPR2A6NF83 97 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 A8MZ25 164 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 H3BUA1 57 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 CORTO00230 105 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 CLN5O75503 358 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 YIF1AO95070 293 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 BRI3O95415 125 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 IFNA5P01569 189 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 IGKV1-17P01599 117 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 IGHG4P01861 327 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 TRGV3P03979 118 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 LINC00869P0C866 280 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 IGLC1P0CG04 106 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 TPT1P13693 172 aaKnown RBP3.6□□□□□ -1.83
PTPN4-206ENST00000441089 HIST1H1BP16401 226 aaKnown RBP3.6□□□□□ -1.83
PTPN4-206ENST00000441089 C4BPBP20851 252 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 GATA2P23769 480 aaPredicted RBP3.6□□□□□ -1.83
PTPN4-206ENST00000441089 PSMB8P28062 276 aa3.6□□□□□ -1.83
PTPN4-206ENST00000441089 OR10J1P30954 320 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms