RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 FABP2P12104 132 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 SSBP2P81877 361 aaPredicted RBP9.52□□□□□ -0.89
SMPD4-209ENST00000439886 HCP5Q6MZN7 132 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 C6orf15Q6UXA7 325 aaPredicted RBP9.52□□□□□ -0.89
SMPD4-209ENST00000439886 PRR20EP86478 221 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 PRR20CP86479 221 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 PRR20DP86480 221 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 PRR20BP86481 221 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 PRR20AP86496 221 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 TMEM97Q5BJF2 176 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 SPTBN2O15020 2390 aa9.52□□□□□ -0.89
SMPD4-209ENST00000439886 IGKV3D-15A0A087WSY6 115 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 IGKV1-16P04430 117 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 LINC00305Q7Z4B0 112 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 NEU4Q8WWR8 484 aaPredicted RBP9.51□□□□□ -0.89
SMPD4-209ENST00000439886 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 HES4Q9HCC6 221 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 IDI2-AS1Q9NZ38 188 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 KBTBD11-OT1A0A1B0GTJ5 212 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 FCER1GP30273 86 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 UFSP1Q6NVU6 142 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
SMPD4-209ENST00000439886 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
SMPD4-209ENST00000439886 LY6G6EA0A0G2JKS1 128 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 A6NDN8 102 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 FAM162BQ5T6X4 162 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 WDR31Q8NA23 367 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 U3KQA8 63 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 MED13LQ71F56 2210 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 PSMB11A5LHX3 300 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 GCSHP23434 173 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 FOXE3Q13461 319 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 GUSBP1Q15486 140 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 C1orf229Q6ZS94 237 aaPredicted RBP9.5□□□□□ -0.89
SMPD4-209ENST00000439886 VSTM2AQ8TAG5 236 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 ZNF418Q8TF45 676 aaPredicted RBP9.5□□□□□ -0.89
SMPD4-209ENST00000439886 PRNDQ9UKY0 176 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 LAMTOR5O43504 91 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 CT45A1Q5HYN5 189 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 CT45A3Q8NHU0 189 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 SRSF12Q8WXF0 261 aaKnown RBP9.5□□□□□ -0.89
SMPD4-209ENST00000439886 IFI27L2Q9H2X8 130 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 RPP21Q9H633 154 aaKnown RBP9.5□□□□□ -0.89
SMPD4-209ENST00000439886 AP5S1Q9NUS5 200 aa9.5□□□□□ -0.89
SMPD4-209ENST00000439886 TRGV5A0A0B4J1U4 118 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 ETDBQ3ZM63 59 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 DUX4L9Q6RFH8 374 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-209ENST00000439886 OR1L4Q8NGR5 311 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 UBTD1Q9HAC8 227 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-209ENST00000439886 C18orf15Q96N68 181 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 EP300Q09472 2414 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-209ENST00000439886 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 MGST3O14880 152 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 IGHV1-2P23083 117 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 EIF4EBP1Q13541 118 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-209ENST00000439886 ADTRPQ96IZ2 230 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 IGF2BP2-AS1Q96M15 143 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 C1QTNF4Q9BXJ3 329 aa9.49□□□□□ -0.89
SMPD4-209ENST00000439886 TEX50A0A1B0GTY4 177 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 VWC2LB2RUY7 222 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 CSN1S1P47710 185 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 SRSF6Q13247 344 aaKnown RBP9.48□□□□□ -0.89
SMPD4-209ENST00000439886 C11orf53Q8IXP5 236 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 H1FXQ92522 213 aaKnown RBP9.48□□□□□ -0.89
SMPD4-209ENST00000439886 CCL13Q99616 98 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 IQCF6A8MYZ5 107 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 C10orf142B7Z368 130 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 C15orf65H3BRN8 121 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 K7EMI3 77 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ACP1P24666 158 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 PRB3Q04118 309 aaPredicted RBP9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ATP1A1-AS1Q5TC04 95 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 SH2D6Q7Z4S9 175 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ZNF329Q86UD4 541 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ABHD17AQ96GS6 310 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 SLC25A2Q9BXI2 301 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 ZGRF1Q86YA3 2104 aa9.48□□□□□ -0.89
SMPD4-209ENST00000439886 NKX2-8O15522 239 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 EPDR1Q9UM22 224 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 SAA1P0DJI8 122 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 KIR2DS2P43631 304 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 LYZP61626 148 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 KIR3DS1Q14943 382 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 ZNF766Q5HY98 468 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 MAFAQ8NHW3 353 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 IGKV1D-17A0A075B6S4 117 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 SRRM4A7MD48 611 aaKnown RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 SS18L1O75177 396 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-209ENST00000439886 CACNG7P62955 275 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 CD69Q07108 199 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 TMEM105Q8N8V8 129 aa9.47□□□□□ -0.89
SMPD4-209ENST00000439886 URB1-AS1Q96HZ7 61 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms