RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
DHFR-201ENST00000439211 TRIP6Q15654 476 aaKnown RBP12.88□□□□□ -0.35
DHFR-201ENST00000439211 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 DPF1Q92782 380 aa12.88□□□□□ -0.35
DHFR-201ENST00000439211 MGST3O14880 152 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 AREGP15514 252 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 DUTP33316 252 aaKnown RBP12.87□□□□□ -0.35
DHFR-201ENST00000439211 TRBV7-9A0A0J9YWB2 115 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 F8W1H4 67 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 C5orf64Q2M2E5 130 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 TTC32Q5I0X7 151 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 Q6ZR03 302 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 CREBBPQ92793 2442 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 C9orf106Q8NAJ2 232 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 NBEAQ8NFP9 2946 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 C20orf78Q9BR46 151 aa12.87□□□□□ -0.35
DHFR-201ENST00000439211 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 MDS2Q8NDY4 140 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 C11orf52Q96A22 123 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 PSG8Q9UQ74 426 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 LOC107984156A0A0G2JMH3 177 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 H3BVH4 76 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 KIR2DL2P43627 348 aaPredicted RBP12.86□□□□□ -0.35
DHFR-201ENST00000439211 ZFAND6Q6FIF0 208 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 C8orf86Q6ZUL3 223 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 C2orf91Q6ZV80 131 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 ARL17AQ8IVW1 177 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 ITLN1Q8WWA0 313 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 RAB9BQ9NP90 201 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 CALYQ9NYX4 217 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
DHFR-201ENST00000439211 KLF5Q13887 457 aaPredicted RBP12.86□□□□□ -0.35
DHFR-201ENST00000439211 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
DHFR-201ENST00000439211 PRSS1P07477 247 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 MYOD1P15172 320 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 GATA3P23771 443 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 COL8A2P25067 703 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 COL8A1P27658 744 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 FXYD7P58549 80 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 K7EMI3 77 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 ABCA4P78363 2273 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 HIF1ANQ9NWT6 349 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 COL6A3P12111 3177 aa12.85□□□□□ -0.35
DHFR-201ENST00000439211 A0A1W2PNU3 283 aaPredicted RBP12.84□□□□□ -0.35
DHFR-201ENST00000439211 SS18L1O75177 396 aaPredicted RBP12.84□□□□□ -0.35
DHFR-201ENST00000439211 CCL13Q99616 98 aa12.84□□□□□ -0.35
DHFR-201ENST00000439211 ENSAO43768 121 aaKnown RBP12.84□□□□□ -0.35
DHFR-201ENST00000439211 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
DHFR-201ENST00000439211 WISP2O76076 250 aa12.84□□□□□ -0.35
DHFR-201ENST00000439211 CD59P13987 128 aa12.84□□□□□ -0.35
DHFR-201ENST00000439211 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.35
DHFR-201ENST00000439211 GDF5OSQ5U4N7 250 aa12.83□□□□□ -0.35
DHFR-201ENST00000439211 PCP2Q8IVA1 136 aa12.83□□□□□ -0.35
DHFR-201ENST00000439211 JPT1Q9UK76 154 aa12.83□□□□□ -0.35
DHFR-201ENST00000439211 CACNA1BQ00975 2339 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 TRAV5A0A0B4J249 113 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
DHFR-201ENST00000439211 PMS2P5A8MQ11 134 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 HSPE1P61604 102 aaKnown RBP12.83□□□□□ -0.36
DHFR-201ENST00000439211 OR11H1Q8NG94 326 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 C18orf15Q96N68 181 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 IDI2-AS1Q9NZ38 188 aa12.83□□□□□ -0.36
DHFR-201ENST00000439211 PLAUP00749 431 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 VDAC2P45880 294 aaPredicted RBP12.82□□□□□ -0.36
DHFR-201ENST00000439211 RBMXL3Q8N7X1 1067 aaKnown RBP12.82□□□□□ -0.36
DHFR-201ENST00000439211 SPANXB1Q9NS25 103 aaPredicted RBP12.82□□□□□ -0.36
DHFR-201ENST00000439211 C1RLQ9NZP8 487 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 C8orf88P0DMB2 117 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 CCL8P80075 99 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 FOXE3Q13461 319 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 ADAMTS20P59510 1910 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 A0A1W2PRD5 423 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 A0A1W2PRF3 423 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 A0A1W2PRM7 423 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 GGTLC3B5MD39 225 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 PIEZO2Q9H5I5 2752 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 KLK10O43240 276 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 CACNG8Q8WXS5 425 aa12.82□□□□□ -0.36
DHFR-201ENST00000439211 PRR33A8MZF0 331 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 MT-ATP8P03928 68 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 APELAP0DMC3 54 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 INSL3P51460 131 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 FXYD2P54710 66 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 ATP5L2Q7Z4Y8 100 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 GFRA3O60609 400 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 ZNF883P0CG24 379 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 GNG5P63218 68 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 C11orf53Q8IXP5 236 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 FLYWCH2Q96CP2 140 aaKnown RBP12.81□□□□□ -0.36
DHFR-201ENST00000439211 SPATA25Q9BR10 227 aa12.81□□□□□ -0.36
DHFR-201ENST00000439211 SIVA1O15304 175 aa12.8□□□□□ -0.36
DHFR-201ENST00000439211 OR2J3O76001 311 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms