RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 C9JCJ5 164 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 ZNF253O75346 499 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 C3orf79P0CE67 100 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGLC2P0DOY2 106 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGLC3P0DOY3 106 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 SRIP30626 198 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 LGALS7P47929 136 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 PRRX1P54821 245 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 ARF6P62330 175 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 FAM167A-AS1Q96KT0 104 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 RNF2Q99496 336 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 C19orf24Q9BVV8 132 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 ZNF586Q9NXT0 402 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 TP73-AS1Q9UF72 201 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 MED13LQ71F56 2210 aa11.08□□□□□ -0.64
PTCHD3-201ENST00000438700 IGHV1-3A0A0C4DH29 117 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 NTF3P20783 257 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 HINT1P49773 126 aaPredicted RBP11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 TMEM136Q6ZRR5 245 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 MRPL52Q86TS9 123 aaKnown RBP11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 PNKDQ8N490 385 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 NHLRC2Q8NBF2 726 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 UTP20O75691 2785 aaKnown RBP11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 BUB1B-PAK6H3BSN5 160 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 MFAP2P55001 183 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 C10orf113Q5VZT2 155 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 UNQ5815/PRO19632Q6UWF5 114 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 NIT1Q86X76 327 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 OR4B1Q8NGF8 309 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 WNK2Q9Y3S1 2297 aa11.07□□□□□ -0.64
PTCHD3-201ENST00000438700 PATE2Q6UY27 113 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 IGFBPL1Q8WX77 278 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 RPEQ96AT9 228 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 BMPR1BO00238 502 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 GOSR1O95249 250 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 RPL27AP46776 148 aaKnown RBP11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 FAM168AQ92567 244 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 LINC00479Q96M42 142 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 SIGLEC9Q9Y336 463 aa11.06□□□□□ -0.64
PTCHD3-201ENST00000438700 ORM2P19652 201 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 ZFP36P26651 326 aaKnown RBP11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 ERASQ7Z444 233 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 CCL19Q99731 98 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 FBXL15Q9H469 300 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 UBR5O95071 2799 aaPredicted RBP11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 FAM208BQ5VWN6 2430 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 A0A1W2PRE2 83 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 HNRNPA3P51991 378 aaKnown RBP11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 CX3CL1P78423 397 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 TSKUQ8WUA8 353 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 KCNS1Q96KK3 526 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 SPOCK3Q9BQ16 436 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 PAXXQ9BUH6 204 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 SERTAD4Q9NUC0 356 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 LRRK2Q5S007 2527 aa11.05□□□□□ -0.64
PTCHD3-201ENST00000438700 M0R1W7 72 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 ZNF324O75467 553 aaPredicted RBP11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 BPIFB3P59826 476 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 PPP1R27Q86WC6 154 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 OR1B1Q8NGR6 318 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 GSX1Q9H4S2 264 aaPredicted RBP11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 SLAQ13239 276 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 KLRD1Q13241 179 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 TIGITQ495A1 244 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 OR1L4Q8NGR5 311 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
PTCHD3-201ENST00000438700 C20orf202A1L168 122 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 CRYGBP07316 175 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 SRSF1Q07955 248 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 PLGLAQ15195 96 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 CDC42EP3Q9UKI2 254 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 SPG11Q96JI7 2443 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 TRAV9-1A0A075B6T8 112 aa11.03□□□□□ -0.64
PTCHD3-201ENST00000438700 LY6LH3BQJ8 138 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 IGLV2-8P01709 118 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 PRTN3P24158 256 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 RBX1P62877 108 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 BLNKQ8WV28 456 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 HILPDAQ9Y5L2 63 aa11.02□□□□□ -0.64
PTCHD3-201ENST00000438700 A0A1W2PRD5 423 aa11.02□□□□□ -0.65
PTCHD3-201ENST00000438700 A0A1W2PRF3 423 aa11.02□□□□□ -0.65
PTCHD3-201ENST00000438700 A0A1W2PRM7 423 aa11.02□□□□□ -0.65
PTCHD3-201ENST00000438700 CD24P25063 80 aa11.02□□□□□ -0.65
PTCHD3-201ENST00000438700 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms